Quantitative Genetics parameters for Generalised Linear Mixed Models

Description

This package gives the values on the observed scale for several quantitative genetics parameter using estimates from a Generalised Linear Mixed Model (GLMM). If a fitness function is assumed or measured, it also predicts the evolutionary response to selection on the observed scale.

The two main functions of this package are QGparams and QGpred. The first allows to compute the quantitative genetics parameters on the observed scale for any given GLMM and its estimates. The second allows to compute a predicted response to evolution on the observed scale using GLMM estimates and an assumed/measured/inferred fitness function.

For some distribution/link models (e.g. Binomial/probit and Poisson and Negative Binomial with logartihm or square-root link), a closed form solutions of the integrals computed by this package are available. They are automatially used by QGparams and this function only.

Details

Package: QGglmm
Type: Package
Version: 0.4
Date: 2016-07-13
License: GPL-2