table_group_fluorescence_spline: Generate a grouped results table for spline fits with average...

In QurvE: Robust and User-Friendly Analysis of Growth and Fluorescence Curves

Generate a grouped results table for spline fits with average and standard deviations

Description

Generate a grouped results table for spline fits with average and standard deviations

Usage

table_group_fluorescence_spline(flTable, html = FALSE)

Arguments

flTable	An object of class flTable
html	(Logical) Should column headers contain html formatting?

Value

A data frame with grouped spline fit results. Empty cells indicate that no reliable fit could be determined.

Examples

# load example dataset
input <- read_data(data.growth = system.file("lac_promoters_growth.txt", package = "QurvE"),
                   data.fl = system.file("lac_promoters_fluorescence.txt", package = "QurvE"),
                   csvsep = "\t",
                   csvsep.fl = "\t")

# Run workflow
res <- fl.workflow(grodata = input, ec50 = FALSE, fit.opt = "s",
                   x_type = "time", norm_fl = TRUE,
                   dr.parameter = "max_slope.spline",
                   suppress.messages = TRUE,
                   parallelize = FALSE)

table_group_fluorescence_spline(res$flFit$flTable)

# with HTML formatting
DT::datatable(table_group_fluorescence_spline(res$flFit$flTable, html = TRUE),
              escape = FALSE) # Do not escape HTML entities

QurvE documentation built on May 29, 2024, 3 a.m.