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**R0**: Estimation of R0 and Real-Time Reproduction Number from Epidemics**print.R0.sR**: Plot the R0/Rt value along with confidence interval of all...

# Plot the R0/Rt value along with confidence interval of all requested models to epidemic data

### Description

Plot the R0/Rt value along with confidence interval of all requested models to epidemic data

### Usage

1 2 |

### Arguments

`x` |
Result of est.R0 (class sR)) |

`...` |
Parameters passed to inner functions |

### Details

For internal use. Called by print.

Tweaked print() function that prints the reproduction number values for each method contained in the object constructed by est.RO().

### Value

Called for its side effect : Prints all R0 or R(t) values from requested estimation methods.

### Author(s)

Pierre-Yves Boelle, Thomas Obadia

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- censored.deviation: Impute censored cases to rebuild longer epidemic vector
- check.incid: Check incid in the input
- check.incid: Check incid in the input
- est.GT: Find the best-fitting GT distribution for a series of serial...
- est.GT: Find the best-fitting GT distribution for a series of serial...
- estimate.R: Estimate R0 for one incidence dataset using several methods
- estimate.R: Estimate R0 for one incidence dataset using several methods
- est.R0.AR: Estimate R0 from attack rate of an epidemic
- est.R0.AR: Estimate R0 from attack rate of an epidemic
- est.R0.EG: Estimate R from exponential growth rate
- est.R0.EG: Estimate R from exponential growth rate
- est.R0.ML: Estimate the reproduction number by maximum likelihood
- est.R0.ML: Estimate the reproduction number by maximum likelihood
- est.R0.SB: Estimate the time dependent reproduction number using a...
- est.R0.SB: Estimate the time dependent reproduction number using a...
- est.R0.TD: Estimate the time dependent reproduction number
- est.R0.TD: Estimate the time dependent reproduction number
- fit.epid: Compute the Poisson log - likelihood between epid and...
- fit.epid: Compute the Poisson log - likelihood between epid and...
- fit.epid.optim: Joint estimation of GT distribution and R
- generation.time: Generation Time distribution
- generation.time: Generation Time distribution
- Germany.1918: Germany.1918 exemple dataset
- Germany.1918: Germany.1918 exemple dataset
- get.scale: Internal scaling function to display proper X-Axis labels
- get.scale: Internal scaling function to display proper X-Axis labels
- GT.chld.hsld: 2009 A/H1N1 observed Generation Time distribution
- GT.chld.hsld: 2009 A/H1N1 observed Generation Time distribution
- H1N1.serial.interval: H1N1 serial interval sample
- H1N1.serial.interval: H1N1 serial interval sample
- impute.incid: Optimiziation routine for incidence imputation
- impute.incid: Optimiziation routine for incidence imputation
- integrity.checks: Input parameters integrity checks
- integrity.checks: Input parameters integrity checks
- plotfit: Generic S3 method to plot either "R0.R" and "R0.sR" objects
- plotfit: Generic S3 method to plot either "R0.R" and "R0.sR" objects
- plotfit.R0.R: Plot the fit of a model to epidemic data
- plotfit.R0.R: Plot the fit of a model to epidemic data
- plotfit.R0.sR: Plot the fit of all requested models to epidemic data
- plotfit.R0.sR: Plot the fit of all requested models to epidemic data
- plotfitRAR: Internal plotfit method for AR estimates
- plotfitRAR: Internal plotfit method for AR estimates
- plotfitRSB: Internal plot method for SB estimates
- plotfitRSB: Internal plot method for SB estimates
- plotfitRxx: Internal plotfit method for EG, ML and TD estimates
- plotfitRxx: Internal plotfit method for EG, ML and TD estimates
- plot.R0.GT: Print the characteristics of the generation time distribution
- plot.R0.GT: Print the characteristics of the generation time distribution
- plot.R0.R: Plot the R0/Rt value along with confidence interval
- plot.R0.R: Plot the R0/Rt value along with confidence interval
- plot.R0.S: Plot objects from sensitivity.analysis
- plot.R0.S: Plot objects from sensitivity.analysis
- plot.R0.sR: Plot the R0/Rt value along with confidence interval of all...
- plot.R0.sR: Plot the R0/Rt value along with confidence interval of all...
- plotRAR: Internal plot method for AR estimates
- plotRAR: Internal plot method for AR estimates
- plotREG: Internal plot method for EG estimates
- plotREG: Internal plot method for EG estimates
- plotRML: Internal plot method for ML estimates
- plotRML: Internal plot method for ML estimates
- plotRSB: Internal plot method for SB estimates
- plotRSB: Internal plot method for SB estimates
- plotRTD: Internal plot method for TD estimates
- plotRTD: Internal plot method for TD estimates
- print.R0.GT: Print the characteristics of the generation time distribution
- print.R0.GT: Print the characteristics of the generation time distribution
- print.R0.R: Print the R estimate
- print.R0.R: Print the R estimate
- print.R0.sR: Plot the R0/Rt value along with confidence interval of all...
- print.R0.sR: Plot the R0/Rt value along with confidence interval of all...
- R0-package: Estimation of R0 and Real-Time Reproduction Number from...
- R0-package: Estimation of R0 and Real-Time Reproduction Number from...
- R.from.r: Compute the discretized Laplace Transform using a discretized...
- R.from.r: Compute the discretized Laplace Transform using a discretized...
- sa.GT: Sensitivity analysis of reproduction ratio with varying GT...
- sa.GT: Sensitivity analysis of reproduction ratio with varying GT...
- sa.time: Sensitivity analysis of basic reproduction ratio to begin/end...
- sa.time: Sensitivity analysis of basic reproduction ratio to begin/end...
- sensitivity.analysis: Sensitivity analysis of basic reproduction ratio to begin/end...
- sensitivity.analysis: Sensitivity analysis of basic reproduction ratio to begin/end...
- sim.epid: Epidemic outbreak simulation
- sim.epid: Epidemic outbreak simulation
- sim.epid.indiv: Influenza-like illness simulation (individual-based model)
- sim.epid.indiv: Influenza-like illness simulation (individual-based model)
- smooth.Rt: Smooth real-time reproduction number over larger time period
- smooth.Rt: Smooth real-time reproduction number over larger time period