R2OpenBUGS: Running OpenBUGS from R

Using this package, it is possible to call a BUGS model, summarize inferences and convergence in a table and graph, and save the simulations in arrays for easy access in R.

Authororiginally written as R2WinBUGS by Andrew Gelman <gelman@stat.columbia.edu>; changes and packaged by Sibylle Sturtz <sturtz@statistik.tu-dortmund.de> and Uwe Ligges <ligges@statistik.tu-dortmund.de>. With considerable contributions by Gregor Gorjanc <gregor.gorjanc@bfro.uni-lj.si> and Jouni Kerman <kerman@stat.columbia.edu>. Adapted to R2OpenBUGS from R2WinBUGS by Neal Thomas.
Date of publication2017-02-22 08:42:15
MaintainerNeal Thomas <snthomas99@gmail.com>
LicenseGPL-2
Version3.2-3.2

View on CRAN

Functions

as.bugs.array Man page
attach.all Man page
attach.bugs Man page
bugs Man page
bugs.data Man page
bugs.inits Man page
bugs.log Man page
bugs.plot.inferences Man page
bugs.plot.summary Man page
bugs.run Man page
bugs.script Man page
bugs.sims Man page
bugs.update.settings Man page
conv.par Man page
decode.parameter.name Man page
detach.all Man page
detach.bugs Man page
formatdata Man page
monitor Man page
plot.bugs Man page
print.bugs Man page
R2OpenBUGS Man page
R2OpenBUGS-package Man page
read.bugs Man page
schools Man page
validateInstallOpenBUGS Man page
write.datafile Man page
write.model Man page

Files

R2OpenBUGS
R2OpenBUGS/inst
R2OpenBUGS/inst/CITATION
R2OpenBUGS/inst/NEWS
R2OpenBUGS/inst/validateInstallOpenBUGS
R2OpenBUGS/inst/validateInstallOpenBUGS/Ratsinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Dyesdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/validOpenBUGSResults.R
R2OpenBUGS/inst/validateInstallOpenBUGS/Linedata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Stacksdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Cameldata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Airinits1.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Surgicalinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Stacksinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Airinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Dugongsdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Surgicaldata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Equivdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Equivmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Asiainits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Dugongsinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Dyesinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Airdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/BiRatsinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Asiadata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Camelinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Surgicalrandmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Airmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Surgicalranddata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Beetlesinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Beetlesmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Surgicalmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Ratsmissdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Surgicalrandinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Linemodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Stacksmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Asiamodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Dyesmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/BiRatsdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Eyesmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Ratsdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/OtreesMVNdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/OtreesMVNinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Camelmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/BiRatsmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Lineinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Eyesinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Ratsmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Dugongsmodel.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Beetlesdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Eyesdata.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/Equivinits.txt
R2OpenBUGS/inst/validateInstallOpenBUGS/OtreesMVNmodel.txt
R2OpenBUGS/inst/model
R2OpenBUGS/inst/model/schools.txt
R2OpenBUGS/inst/doc
R2OpenBUGS/inst/doc/R2OpenBUGS.Rnw
R2OpenBUGS/inst/doc/R2OpenBUGS.pdf
R2OpenBUGS/NAMESPACE
R2OpenBUGS/data
R2OpenBUGS/data/schools.txt
R2OpenBUGS/R
R2OpenBUGS/R/bugs.update.settings.R R2OpenBUGS/R/monitor.R R2OpenBUGS/R/bugs.R R2OpenBUGS/R/attach.all.R R2OpenBUGS/R/findOpenBUGS.R R2OpenBUGS/R/bugs.sims.R R2OpenBUGS/R/bugs.plot.inferences.R R2OpenBUGS/R/read.bugs.R R2OpenBUGS/R/bugs.log.R R2OpenBUGS/R/bugs.data.R R2OpenBUGS/R/bugs.script.R R2OpenBUGS/R/formatdata.R R2OpenBUGS/R/write.model.R R2OpenBUGS/R/as.bugs.array.R R2OpenBUGS/R/conv.par.R R2OpenBUGS/R/print.bugs.R R2OpenBUGS/R/write.datafile.R R2OpenBUGS/R/decode.parameter.name.R R2OpenBUGS/R/as.mcmc.list.bugs.R R2OpenBUGS/R/wineutils.R R2OpenBUGS/R/bugs.inits.R R2OpenBUGS/R/bugs.run.R R2OpenBUGS/R/validateInstallOpenBUGS.R R2OpenBUGS/R/plot.bugs.R R2OpenBUGS/R/bugs.plot.summary.R
R2OpenBUGS/vignettes
R2OpenBUGS/vignettes/literatur.bst
R2OpenBUGS/vignettes/Z.cls
R2OpenBUGS/vignettes/countssw.pdf
R2OpenBUGS/vignettes/plot.pdf
R2OpenBUGS/vignettes/benzolsw.pdf
R2OpenBUGS/vignettes/R2OpenBUGS.Rnw
R2OpenBUGS/vignettes/literatur.bib
R2OpenBUGS/vignettes/expectedsw.pdf
R2OpenBUGS/vignettes/bugs.tex
R2OpenBUGS/vignettes/RdRW.sty
R2OpenBUGS/MD5
R2OpenBUGS/build
R2OpenBUGS/build/vignette.rds
R2OpenBUGS/DESCRIPTION
R2OpenBUGS/man
R2OpenBUGS/man/bugs.update.settings.Rd R2OpenBUGS/man/bugs.inits.Rd R2OpenBUGS/man/attach.all.Rd R2OpenBUGS/man/bugs.run.Rd R2OpenBUGS/man/monitor.Rd R2OpenBUGS/man/read.bugs.Rd R2OpenBUGS/man/bugs.sims.Rd R2OpenBUGS/man/bugs.plot.Rd R2OpenBUGS/man/print.bugs.Rd R2OpenBUGS/man/schools.Rd R2OpenBUGS/man/as.bugs.array.Rd R2OpenBUGS/man/bugs.data.Rd R2OpenBUGS/man/plot.bugs.Rd R2OpenBUGS/man/R2WinBUGS-package.Rd R2OpenBUGS/man/validateInstallOpenBUGS.Rd R2OpenBUGS/man/bugs.script.Rd R2OpenBUGS/man/write.datafile.Rd R2OpenBUGS/man/write.model.Rd R2OpenBUGS/man/bugs.log.Rd R2OpenBUGS/man/decode.parameter.name.Rd R2OpenBUGS/man/bugs.Rd

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