RCALI: Calculation of the Integrated Flow of Particles Between Polygons

Calculate the flow of particles between polygons by two integration methods: integration by a cubature method and integration on a grid of points.

Author
Annie Bouvier, Kien Kieu, Kasia Adamczyk, and Herve Monod
Date of publication
2016-09-21 16:05:03
Maintainer
Annie Bouvier <Annie.Bouvier@inra.fr>
License
GPL-3
Version
0.2-17
URLs

View on CRAN

Man pages

as.poly
Create an object of class 'poly'
califlopp
Calculation of the Integrated Flow of Particles between...
crlistpoly
Create an object of class 'listpoly' from objects of class...
crpoly
Create un object of class 'poly' by clicking on points
export
Generic for 'export'
export.default
export.default method
export.listpoly
Create a polygons file in format 1.
fpollen
Individual pollen dispersion function
fseed
Individual seed dispersion function
generPoly
Generate a regular grid of polygons
generVois
Generate the neighbors of each polygon of a regular grid
getRes
Read a result-file of 'califlopp'
listpoly-class
Class 'listpoly'
plot.listpoly
Plot of an object of class 'listpoly'
plot.poly
Plot of an object of class 'poly'
poly-class
Class 'poly'
range.listpoly
Range of the coordinates of an object of class 'listpoly'
RCALI-package
Calculation of the Integrated Flow of Particles Between...
readpoly1
Read a polygons file in format 1
readpoly2
Read a polygons file in format 2

Files in this package

RCALI
RCALI/inst
RCALI/inst/CITATION
RCALI/inst/extdata
RCALI/inst/extdata/poly.txt
RCALI/inst/doc
RCALI/inst/doc/index.html
RCALI/inst/doc/RCALIvignette.tex
RCALI/inst/doc/RCALIvignette.pdf
RCALI/inst/doc/VignetteDir
RCALI/inst/doc/VignetteDir/graphics
RCALI/inst/doc/VignetteDir/graphics/triangulation_minkowski.pstex
RCALI/inst/doc/VignetteDir/graphics/dispersion.eps
RCALI/inst/doc/VignetteDir/graphics/integral_geom_1.eps
RCALI/inst/doc/VignetteDir/graphics/div_minkowski_convexe.pstex_t
RCALI/inst/doc/VignetteDir/graphics/phi.eps.sv
RCALI/inst/doc/VignetteDir/graphics/parcelles.ps
RCALI/inst/doc/VignetteDir/graphics/div-poly-convexe.eps
RCALI/inst/doc/VignetteDir/graphics/integral_geom_4.eps
RCALI/inst/doc/VignetteDir/graphics/integral_geom_4.eps.sv
RCALI/inst/doc/VignetteDir/graphics/parcelles.eps
RCALI/inst/doc/VignetteDir/graphics/adapt_carre.eps
RCALI/inst/doc/VignetteDir/graphics/triangulation_minkowski.fig
RCALI/inst/doc/VignetteDir/graphics/test_cvge_1.eps
RCALI/inst/doc/VignetteDir/graphics/integrale.eps.fr
RCALI/inst/doc/VignetteDir/graphics/triangulation_minkowski.pstex_t
RCALI/inst/doc/VignetteDir/graphics/test_cvge_1.eps.sv
RCALI/inst/doc/VignetteDir/graphics/savepoly.eps
RCALI/inst/doc/VignetteDir/graphics/koco_rule.eps
RCALI/inst/doc/VignetteDir/graphics/reduc_minkowski.pstex
RCALI/inst/doc/VignetteDir/graphics/chapExample
RCALI/inst/doc/VignetteDir/graphics/chapExample/f5.eps
RCALI/inst/doc/VignetteDir/graphics/chapExample/ICnr.eps
RCALI/inst/doc/VignetteDir/graphics/chapExample/ICstep.eps
RCALI/inst/doc/VignetteDir/graphics/chapExample/ICneval.eps
RCALI/inst/doc/VignetteDir/graphics/chapExample/ICreler.eps
RCALI/inst/doc/VignetteDir/graphics/inpoly.eps
RCALI/inst/doc/VignetteDir/graphics/reduc_minkowski.fig
RCALI/inst/doc/VignetteDir/graphics/ex_fseed.eps
RCALI/inst/doc/VignetteDir/graphics/parcelles.eps.sv
RCALI/inst/doc/VignetteDir/graphics/ex_crconvex.eps
RCALI/inst/doc/VignetteDir/graphics/octo.eps.08092006
RCALI/inst/doc/VignetteDir/graphics/parcelles.ps.sv
RCALI/inst/doc/VignetteDir/graphics/exgraphe3.eps
RCALI/inst/doc/VignetteDir/graphics/div-poly-convexe.fig
RCALI/inst/doc/VignetteDir/graphics/integrale.eps
RCALI/inst/doc/VignetteDir/graphics/div_minkowski_convexe.fig
RCALI/inst/doc/VignetteDir/graphics/pollen.eps
RCALI/inst/doc/VignetteDir/graphics/integral_geom_5.eps
RCALI/inst/doc/VignetteDir/graphics/octo0.eps.08092006
RCALI/inst/doc/VignetteDir/graphics/adapt_rule.eps
RCALI/inst/doc/VignetteDir/graphics/reduc_minkowski.pstex_t
RCALI/inst/doc/VignetteDir/graphics/adapt.eps
RCALI/inst/doc/VignetteDir/graphics/ex_fpollen.eps
RCALI/inst/doc/VignetteDir/graphics/integral_geom_4.fig
RCALI/inst/doc/VignetteDir/graphics/seed.eps
RCALI/inst/doc/VignetteDir/graphics/div_minkowski_convexe.pstex
RCALI/inst/doc/VignetteDir/graphics/integral_geom_2.eps
RCALI/inst/doc/VignetteDir/graphics/airepoly.eps
RCALI/inst/doc/VignetteDir/integral_reduction.tex
RCALI/inst/doc/VignetteDir/details.aux
RCALI/inst/doc/VignetteDir/abstract.tex
RCALI/inst/doc/VignetteDir/algorithm2e.sty
RCALI/inst/doc/VignetteDir/multidimensional_integration.aux
RCALI/inst/doc/VignetteDir/multidimensional_integration.tex
RCALI/inst/doc/VignetteDir/introduction.tex
RCALI/inst/doc/VignetteDir/credits.tex
RCALI/inst/doc/VignetteDir/biblio
RCALI/inst/doc/VignetteDir/biblio/kien.bib
RCALI/inst/doc/VignetteDir/biblio/auto
RCALI/inst/doc/VignetteDir/biblio/auto/biblio.el
RCALI/inst/doc/VignetteDir/biblio/hm.bib
RCALI/inst/doc/VignetteDir/biblio/biblio.aux
RCALI/inst/doc/VignetteDir/biblio/biblio.bib
RCALI/inst/doc/VignetteDir/example.tex
RCALI/inst/doc/VignetteDir/developer_guide.aux
RCALI/inst/doc/VignetteDir/abstract.aux
RCALI/inst/doc/VignetteDir/details.tex
RCALI/inst/doc/VignetteDir/installation_guide.tex
RCALI/inst/doc/VignetteDir/installation_guide.aux
RCALI/inst/doc/VignetteDir/developer_guide.tex
RCALI/inst/doc/VignetteDir/geometric_computation.aux
RCALI/inst/doc/VignetteDir/credits.aux
RCALI/inst/doc/VignetteDir/integral_reduction.aux
RCALI/inst/doc/VignetteDir/example.aux
RCALI/inst/doc/VignetteDir/geometric_computation.tex
RCALI/inst/doc/VignetteDir/introduction.aux
RCALI/inst/doc/VignetteDir/logo
RCALI/inst/doc/VignetteDir/logo/logoMIA.eps
RCALI/inst/doc/VignetteDir/logo/logoinra.eps
RCALI/inst/doc/VignetteDir/CONTENTS
RCALI/inst/doc/art_ems2008.pdf
RCALI/tests
RCALI/tests/cte.Rout.save
RCALI/tests/fdispersions.R
RCALI/tests/petit.R
RCALI/tests/disppollen.R
RCALI/tests/cte.R
RCALI/tests/paysage.param
RCALI/tests/dispseed.R
RCALI/tests/dispseed.Rout.save
RCALI/tests/fdispersions.Rout.save
RCALI/tests/paysage.data
RCALI/tests/disppollen.Rout.save
RCALI/tests/paysage.grid1.1res
RCALI/tests/paysage.cubres
RCALI/tests/paysage.R
RCALI/tests/cubresult
RCALI/src
RCALI/src/calireal.h
RCALI/src/mt19937ar.cc
RCALI/src/read1Poly.h
RCALI/src/writeDebug.cc
RCALI/src/Adapt.h
RCALI/src/quantiles.cc
RCALI/src/methodGrid.cc
RCALI/src/intersection.h
RCALI/src/methodAdapt.h
RCALI/src/go.h
RCALI/src/util.cc
RCALI/src/Point.h
RCALI/src/functions.cc
RCALI/src/readPoly.cc
RCALI/src/Triangle.cc
RCALI/src/geom.cc
RCALI/src/read1Poly.cc
RCALI/src/functions.h
RCALI/src/go.cc
RCALI/src/Integrand.h
RCALI/src/main.cc
RCALI/src/mt19937ar.h
RCALI/src/Point.cc
RCALI/src/methodIntegr.h
RCALI/src/methodAdapt.cc
RCALI/src/calitypes.h
RCALI/src/califunc.h
RCALI/src/crConvexSp.cc
RCALI/src/calierror.h
RCALI/src/calidefs.h
RCALI/src/zoneintegration.h
RCALI/src/intersection.cc
RCALI/src/fluxsd.cc
RCALI/src/calimacros.h
RCALI/src/caliconfig.h
RCALI/src/zoneintegration.cc
RCALI/src/Adapt.cc
RCALI/src/Vector.cc
RCALI/src/util.h
RCALI/src/caliboolean.h
RCALI/src/crConvexSp.h
RCALI/src/methodGrid.h
RCALI/src/writeDebug.h
RCALI/src/readPoly.h
RCALI/src/Rule.h
RCALI/src/geom.h
RCALI/src/Vector.h
RCALI/src/Triangle.h
RCALI/src/Rule.cc
RCALI/src/PileTr.cc
RCALI/src/PileTr.h
RCALI/NAMESPACE
RCALI/demo
RCALI/demo/regular.R
RCALI/demo/00Index
RCALI/NEWS
RCALI/R
RCALI/R/generPoly.R
RCALI/R/generVois.R
RCALI/R/fdispersions.R
RCALI/R/readpoly2.R
RCALI/R/poly-methods.R
RCALI/R/sourceDir.R
RCALI/R/getRes.R
RCALI/R/califlopp.R
RCALI/R/listpoly-methods.R
RCALI/R/readpoly1.R
RCALI/MD5
RCALI/DESCRIPTION
RCALI/LICENSE.note
RCALI/man
RCALI/man/generVois.Rd
RCALI/man/listpoly-class.Rd
RCALI/man/range.listpoly.Rd
RCALI/man/fpollen.Rd
RCALI/man/generPoly.Rd
RCALI/man/RCALI-package.Rd
RCALI/man/as.poly.Rd
RCALI/man/export.listpoly.Rd
RCALI/man/export.Rd
RCALI/man/readpoly1.Rd
RCALI/man/export.default.Rd
RCALI/man/poly-class.Rd
RCALI/man/fseed.Rd
RCALI/man/plot.poly.Rd
RCALI/man/crlistpoly.Rd
RCALI/man/getRes.Rd
RCALI/man/plot.listpoly.Rd
RCALI/man/readpoly2.Rd
RCALI/man/crpoly.Rd
RCALI/man/califlopp.Rd
RCALI/.Rinstignore