RImageJROI: Read 'ImageJ' Region of Interest (ROI) Files
Version 0.1.1

Provides functions to read 'ImageJ' (http://imagej.nih.gov/ij/) Region of Interest (ROI) files, to plot the ROIs and to convert them to 'spatstat' (http://spatstat.org/) spatial patterns.

Browse man pages Browse package API and functions Browse package files

AuthorDavid C Sterratt [aut, cph, cre], Mikko Vihtakari [aut, cph]
Date of publication2015-05-07 18:01:49
MaintainerDavid C Sterratt <david.c.sterratt@ed.ac.uk>
LicenseGPL-3
Version0.1.1
URL https://github.com/davidcsterratt/RImageJROI
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("RImageJROI")

Man pages

ij2spatstat: Convert 'ijroi' and 'ijzip' objects to spatstat spatial...
plot.ijroi: Plot ijroi object
plot.ijzip: Plot ijzip object
print.ijroi: Print 'ijroi' objects
read.ijroi: Read an ImageJ ROI file
read.ijzip: Read ImageJ zip file containing several ROI files
RImageJROI: Read ImageJ Region of Interest (ROI) files

Functions

RImageJROI Man page
RImageJROI-package Man page
ij2spatstat Man page Source code
plot.ijroi Man page Source code
plot.ijzip Man page Source code
print.ijroi Man page Source code
read.ijroi Man page Source code
read.ijzip Man page Source code

Files

inst
inst/extdata
inst/extdata/ijroi
inst/extdata/ijroi/imagej-logo.png
inst/extdata/ijroi/oval.roi
inst/extdata/ijroi/polygon.roi
inst/extdata/ijroi/text.roi
inst/extdata/ijroi/elliptical.roi
inst/extdata/ijroi/ijzip.zip
inst/extdata/ijroi/freehand_line.roi
inst/extdata/ijroi/multi_point.roi
inst/extdata/ijroi/arrow.roi
inst/extdata/ijroi/selection_brush.roi
inst/extdata/ijroi/segmented_line.roi
inst/extdata/ijroi/arrow-outline-doubleheaded.roi
inst/extdata/ijroi/circle.roi
inst/extdata/ijroi/line.roi
inst/extdata/ijroi/rounded_rect.roi
inst/extdata/ijroi/angle.roi
inst/extdata/ijroi/freehand_selection.roi
inst/extdata/ijroi/rect.roi
tests
tests/testthat.R
tests/testthat
tests/testthat/test-readroi.R
NAMESPACE
demo
demo/00Index
demo/ijroi.R
NEWS
R
R/plot.ijroi.R
R/print.ijroi.R
R/ij2spatstat.R
R/read.ijroi.R
R/plot.ijzip.R
R/read.ijzip.R
R/RImageJROI-package.r
MD5
DESCRIPTION
man
man/plot.ijzip.Rd
man/read.ijroi.Rd
man/RImageJROI.Rd
man/plot.ijroi.Rd
man/read.ijzip.Rd
man/print.ijroi.Rd
man/ij2spatstat.Rd
RImageJROI documentation built on May 20, 2017, 4:59 a.m.