| addHistoSpec | Specify data parameters |
| checkPlot | Check the selection for plotting |
| checkSelction | Checks user inputs |
| convert2Score | Converts any object that is not zero or a positive number to... |
| detailedResults2HTML | Saves results as an HTML file |
| detailedResults2Output | Print results to the GUI window |
| exampleHistData | Example histology data |
| filterData | Filters problematic data |
| getDir | Attain the name of a directory |
| Histopath | GUI for analysis of histopathological data |
| openCB | Open a csv file |
| otherPath | Other analyses for histopathological endpoints |
| plotPath | Plot histopathological data |
| plotRSCABS | Plots histopathological data. |
| popMessage | Pops up a message |
| prepDataRSCABS | Prepares data for an RSCABS analysis |
| RSCABK | Runs the kth slice of RSCABS |
| RSCABSMain | Cleans data and runs RSCABS when called from the GUI... |
| RSCABS-package | Runs the Rao-Scott adjusted Cochran-Armitage trend test by... |
| runDetailedResults | Attain detailed results on an endpoint |
| runEffectSelect | Runs a detailed analysis on an endpoint |
| runRSCABS | Runs RSCABS |
| runStdSubset | Subset the data used in Histopath |
| saveCB | Attain the name of a file to be saved |
| saveFile | Saves a data set |
| selectPara | Window to declare the names of variables and values |
| setPlotParms | Sets the default plotting parameters for RSCABS |
| stepDownRSCABS | Performs the step down aspect of RSCABS |
| stepKRSCABS | Steps through the severity score for a given effect |
| subsetDataKeep | Subsets data |
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