Man pages for RScelestial
Scelestial: Steiner Tree Based Single-Cell Lineage Tree Inference

as.mutation.matrixConversion of ten-state sequencing matrix to 0/1-mutation...
as.ten.state.matrixConversion of 0/1 matrix to 10-state matrix
as.ten.state.matrix.from.node.seqGenerates 10-state sequence matrix from name/10-char string...
distance.matrix.scelestialCalculates distance matrix for result of scelestial
distance.matrix.treeCalculates distance matrix for a nodes on a tree.
distance.matrix.true.treeCalculates distance matrix for a synthetized data
dot-scelestialInternal function for running scelestial algorithm.
dot-synthesisInternal function for generating synthetic single-cell data...
LiBladder invasive single cell tumor dataset
my.dfsRuns DFS on tree and calculates parent of each node as well...
my.general.dfsRunning depth first search on a tree and calling functions on...
read.sequence.tableRead mutation table
RScelestialRScelestial: An R wrapper for scelestial algorithm for...
scelestialInfer the single-cell phylogenetic tree
synthesisSynthesize single-cell data through tumor simulation
tree.plotPlotting the tree
RScelestial documentation built on March 24, 2020, 1:08 a.m.