ZigZagGaussian: ZigZagGaussian

In RZigZag: Zig-Zag Sampler

Description

Applies the Zig-Zag Sampler to a Gaussian target distribution, as detailed in Bierkens, Fearnhead, Roberts, The Zig-Zag Process and Super-Efficient Sampling for Bayesian Analysis of Big Data, 2016. Assume potential of the form

U(x) = (x - mu)^T V (x - mu)/2,

i.e. a Gaussian with mean vector mu and covariance matrix inv(V)

Usage

ZigZagGaussian(V, mu, n_iter = -1L, finalTime = -1, x0 = numeric(0),
  v0 = numeric(0))

Arguments

V	the inverse covariance matrix (or precision matrix) of the Gaussian target distribution.
mu	mean of the Gaussian target distribution
n_iter	Number of algorithm iterations; will result in the equivalent amount of skeleton points in Gaussian case because no rejections are needed.
finalTime	If provided and nonnegative, run the sampler until a trajectory of continuous time length finalTime is obtained (ignoring the value of n_iterations)
x0	starting point (optional, if not specified taken to be the origin)
v0	starting direction (optional, if not specified taken to be +1 in every component)

Value

Returns a list with the following objects:

Times: Vector of switching times

Positions: Matrix whose columns are locations of switches. The number of columns is identical to the length of skeletonTimes. Be aware that the skeleton points themselves are NOT samples from the target distribution.

Velocities: Matrix whose columns are velocities just after switches. The number of columns is identical to the length of skeletonTimes.

Examples

V <- matrix(c(3,1,1,3),nrow=2)
mu <- c(2,2)
result <- ZigZagGaussian(V, mu, 100)
plot(result$Positions[1,], result$Positions[2,],type='l',asp=1)

RZigZag documentation built on July 20, 2019, 9:03 a.m.