RadOnc: Analytical Tools for Radiation Oncology
Version 1.1.3

Designed for the import, analysis, and visualization of dosimetric and volumetric data in Radiation Oncology, the tools herein enable import of dose-volume histogram information from multiple treatment planning system platforms and 3D structural representations and dosimetric information from 'DICOM-RT' files. These tools also enable subsequent visualization and statistical analysis of these data.

AuthorReid F. Thompson <reid.thompson@gmail.com>
Date of publication2017-03-28 06:06:02 UTC
MaintainerReid F. Thompson <reid.thompson@gmail.com>
LicenseGPL (>= 2)
Version1.1.3
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("RadOnc")

Getting started

Package overview

Popular man pages

DVH-class: Class '"DVH"'
gEUD: Generalized Equivalent Uniform Dose (gEUD) Calculation
RadOnc-package: Analytical Tools for Radiation Oncology
read.DICOM.RT: Read DICOM-RT data from an input directory
read.DVH: Read DVH data from input file
RTdata-class: Class '"RTdata"'
subset: Extract a subset of a larger DVH list
See all...

All man pages Function index File listing

Man pages

calculate.DVH: Calculate DVH data for one or more structure(s) using a dose...
compareStructures: Compare Axially-Defined Three-Dimensional Structures
DVH-class: Class '"DVH"'
DVH.list-class: Class '"DVH.list"'
get.HU: Extract Hounsfield Unit (HU) data for one or more...
gEUD: Generalized Equivalent Uniform Dose (gEUD) Calculation
LQE: Linear Quadratic Extrapolated (LQE) Dose Conversion
plot-methods: Additional Methods for Function 'plot' in Package 'graphics'
RadOnc: DVH data for 'John Doe' and 'Jane Doe'; 3D structural data...
RadOnc-package: Analytical Tools for Radiation Oncology
read.DICOM.RT: Read DICOM-RT data from an input directory
read.DVH: Read DVH data from input file
RTdata-class: Class '"RTdata"'
structure3D-class: Class '"structure3D"'
structure.list-class: Class '"structure.list"'
subset: Extract a subset of a larger DVH list
zDVH-class: Class '"zDVH"'

Functions

$,DVH-method Man page
$,DVH.list-method Man page
$,RTdata-method Man page
$,structure.list-method Man page
$,structure3D-method Man page
$,zDVH-method Man page
$<-,DVH-method Man page
$<-,RTdata-method Man page
$<-,structure3D-method Man page
$<-,zDVH-method Man page
DVH Man page
DVH-class Man page
DVH.list Man page
DVH.list-class Man page
LQE Man page
LQE,ANY,missing-method Man page
LQE,DVH,numeric-method Man page
LQE,DVH.list,numeric-method Man page
LQE,numeric,numeric-method Man page
LQE-methods Man page
RTdata-class Man page
RadOnc Man page
RadOnc-data Man page
RadOnc-package Man page
[,DVH-method Man page
[,DVH.list-method Man page
[,structure.list-method Man page
[,zDVH-method Man page
[[,DVH.list-method Man page
[[,structure.list-method Man page
[[<-,DVH.list-method Man page
[[<-,structure.list-method Man page
approx3D Source code
as.list,DVH.list-method Man page
as.list,structure.list-method Man page
c,DVH-method Man page
c,DVH.list-method Man page
c,structure.list-method Man page
c,structure3D-method Man page
c,zDVH-method Man page
calc.DVH.ATC Source code
calc.DVH.axial Source code
calc.DVH.surface Source code
calc.HU.axial Source code
calculate.DVH Man page
calculate.DVH,ANY,ANY-method Man page
calculate.DVH,ANY,array-method Man page
calculate.DVH,ANY,missing-method Man page
calculate.DVH,RTdata,array-method Man page
calculate.DVH,RTdata,missing-method Man page
calculate.DVH,structure.list,array-method Man page
calculate.DVH,structure3D,array-method Man page
calculate.DVH-methods Man page
compareStructures Man page Source code
compareStructures.axial Man page Source code
compareStructures.grid Man page
compareStructures.hausdorff Man page Source code
compareStructures.surface Man page Source code
convert.DVH Source code
cord Man page
dim,structure3D-method Man page
gEUD Man page
gEUD,ANY,missing-method Man page
gEUD,DVH,numeric-method Man page
gEUD,DVH.list,numeric-method Man page
gEUD-methods Man page
get.HU Man page
get.HU,ANY,ANY-method Man page
get.HU,ANY,array-method Man page
get.HU,ANY,missing-method Man page
get.HU,RTdata,missing-method Man page
get.HU,list,array-method Man page
get.HU,structure.list,array-method Man page
get.HU,structure3D,array-method Man page
get.HU-methods Man page
initialize,DVH-method Man page
initialize,DVH.list-method Man page
initialize,structure.list-method Man page
initialize,zDVH-method Man page
is.empty Source code
janedoe Man page
janedoe.RTdata Man page
johndoe Man page
lapply,DVH.list-method Man page
lapply,structure.list-method Man page
length,DVH.list-method Man page
length,structure.list-method Man page
lines,DVH-method Man page
mad,DVH.list-method Man page
mandible Man page
max,DVH-method Man page
max,DVH.list-method Man page
max,zDVH-method Man page
mean,DVH-method Man page
mean,DVH.list-method Man page
mean,zDVH-method Man page
median,DVH.list-method Man page
min,DVH-method Man page
min,DVH.list-method Man page
min,zDVH-method Man page
names,DVH-method Man page
names,DVH.list-method Man page
names,RTdata-method Man page
names,structure.list-method Man page
names,structure3D-method Man page
names,zDVH-method Man page
names<-,DVH-method Man page
names<-,DVH.list-method Man page
names<-,RTdata-method Man page
names<-,structure.list-method Man page
names<-,structure3D-method Man page
names<-,zDVH-method Man page
plot,ANY,ANY-method Man page
plot,DVH,ANY-method Man page
plot,DVH,DVH-method Man page
plot,DVH,missing-method Man page
plot,DVH,zDVH-method Man page
plot,DVH-method Man page
plot,DVH.list,ANY-method Man page
plot,DVH.list,missing-method Man page
plot,DVH.list-method Man page
plot,structure.list,ANY-method Man page
plot,structure.list,missing-method Man page
plot,structure.list-method Man page
plot,structure3D,ANY-method Man page
plot,structure3D,missing-method Man page
plot,zDVH,ANY-method Man page
plot,zDVH,DVH-method Man page
plot,zDVH,missing-method Man page
plot,zDVH,zDVH-method Man page
plot,zDVH-method Man page
plot-methods Man page
plot.DVH Man page
plot.DVH.bars Source code
plot.DVH.corr Source code
plot.DVH.groups Source code
plot.DVH.individual Source code
plot.DVH.list Man page
plot.DVH.ttest Source code
plot.DVH.wilcox Source code
plot.zDVH Man page Source code
pointInPoly2D Source code
points,DVH-method Man page
print,DVH-method Man page
print,DVH.list-method Man page
print,RTdata-method Man page
print,structure.list-method Man page
print,structure3D-method Man page
print,zDVH-method Man page
quantile,DVH.list-method Man page
range,DVH-method Man page
range,DVH.list-method Man page
range,structure.list-method Man page
range,structure3D-method Man page
read.DICOM.RT Man page Source code
read.DVH Man page Source code
read.DVH.Aria10 Source code
read.DVH.Aria11 Source code
read.DVH.Aria8 Source code
read.DVH.CadPlan Source code
read.DVH.DICOM Source code
read.DVH.Monaco Source code
read.DVH.RayStation Source code
read.DVH.TomoTherapy Source code
rev,DVH.list-method Man page
rev,structure.list-method Man page
sd,DVH.list-method Man page
show,DVH-method Man page
show,DVH.list-method Man page
show,RTdata-method Man page
show,structure.list-method Man page
show,structure3D-method Man page
show,zDVH-method Man page
stomach Man page
structure.list-class Man page
structure3D-class Man page
subset,DVH-method Man page
subset,DVH.list-method Man page
subset-methods Man page
subset.DVH.list Man page Source code
sum,DVH-method Man page
sum,DVH.list-method Man page
t.test,DVH.list-method Man page
teeth Man page
var,DVH.list-method Man page
wilcox.test,DVH.list-method Man page
zDVH Man page
zDVH-class Man page

Files

inst
inst/NEWS.Rd
inst/extdata
inst/extdata/John_Doe.dvh
inst/extdata/Jane_Doe.dvh
inst/doc
inst/doc/RadOnc.Rnw
inst/doc/RadOnc.R
inst/doc/RadOnc.pdf
NAMESPACE
demo
demo/RadOnc.R
demo/00Index
data
data/RadOnc.RData
data/datalist
R
R/CLASSES.R
R/mean.DVH.R
R/calculate.DVH.R
R/subset.R
R/DVH.list.R
R/plot.DVH.R
R/t.test.DVH.R
R/read.DICOM.RT.R
R/approx3D.R
R/read.DVH.R
R/wilcox.DVH.R
R/RTdata.R
R/zDVH.R
R/structure3D.R
R/structure.list.R
R/convert.DVH.R
R/get.HU.R
R/LQE.R
R/gEUD.R
R/DVH.R
R/compareStructures.R
vignettes
vignettes/mandible.png
vignettes/RadOnc.bib
vignettes/RadOnc.Rnw
vignettes/cord.png
MD5
build
build/vignette.rds
DESCRIPTION
man
man/read.DICOM.RT.Rd
man/zDVH-class.Rd
man/LQE.Rd
man/plot-methods.Rd
man/structure.list-class.Rd
man/RadOnc-package.Rd
man/compareStructures.Rd
man/RadOnc.Rd
man/DVH.list-class.Rd
man/structure3D-class.Rd
man/calculate.DVH.Rd
man/DVH-class.Rd
man/get.HU.Rd
man/gEUD.Rd
man/RTdata-class.Rd
man/read.DVH.Rd
man/subset.Rd
RadOnc documentation built on May 19, 2017, 9:20 a.m.