generate_colors: Generate color mapping for taxonomic groups

In Rclade: Automated Deep-Time Phylogenetic Tree Collapsing and Visualization

Generate color mapping for taxonomic groups

Description

Generate color mapping for taxonomic groups

Usage

generate_colors(groups, palette = "viridis", color_mapping = NULL)

Arguments

groups	Character vector of group names
palette	Palette name (e.g., "viridis", "Set1", "rainbow") or color vector
color_mapping	Named vector of specific color assignments (highest priority)

Value

Named color vector (names = groups)

Rclade documentation built on Sept. 26, 2026, 5:07 p.m.