cv.env: Cross validation for env

View source: R/cv.env.R

cv.envR Documentation

Cross validation for env

Description

Compute the prediction error for the response envelope estimator using m-fold cross validation.

Usage

cv.env(X, Y, u, m, nperm)

Arguments

X

Predictors. An n by p matrix, p is the number of predictors. The predictors can be univariate or multivariate, discrete or continuous.

Y

Multivariate responses. An n by r matrix, r is the number of responses and n is number of observations. The responses must be continuous variables.

u

Dimension of the envelope. An integer between 0 and r.

m

A positive integer that is used to indicate m-fold cross validation.

nperm

A positive integer indicating number of permutations of the observations, m-fold cross validation is run on each permutation.

Details

This function computes prediction errors using m-fold cross validation. For a fixed dimension u, the data is randomly partitioned into m parts, each part is in turn used for testing for the prediction performance while the rest m-1 parts are used for training. This process is repeated for nperm times, and average prediction error is reported. As Y is multivariate, the identity inner product is used for computing the prediction errors.

Value

The output is a real nonnegative number.

cvPE

The prediction error estimated by m-fold cross validation.

Examples

data(wheatprotein)
X <- wheatprotein[, 8]
Y <- wheatprotein[, 1:6]
u <- u.env(X, Y)
u

m <- 5
nperm <- 50
cvPE <- cv.env(X, Y, 1, m, nperm)
cvPE

Renvlp documentation built on Aug. 8, 2022, 1:06 a.m.

Related to cv.env in Renvlp...