View source: R/cooks.distance.R
| cooks.distance.brma | R Documentation |
Computes Cook's distance for a fitted brma object. Cook's distance measures the aggregate influence of each observation on the model coefficients.
## S3 method for class 'brma'
cooks.distance(model, ...)
model |
a fitted brma object. |
... |
additional arguments (currently ignored). |
Cook's distance is computed as a PSIS leave-one-out deletion diagnostic. For
each observation i, normalized PSIS weights estimate the fitted values
under the leave-one-out posterior. The distance is the posterior Mahalanobis
distance between the full-data and leave-one-out fitted-value vectors:
D_i = \frac{\Delta_i' V_\mu^+ \Delta_i}{P}
where \Delta_i = \hat{\mu} - \hat{\mu}_{(-i)}, V_\mu^+ is the
generalized inverse of the full-posterior fitted-value covariance, and
P is the rank of the fixed-effect model matrix.
A numeric vector of Cook's distance values, one for each observation.
influence.brma, dffits.brma, hatvalues.brma
## Not run:
if (requireNamespace("metadat", quietly = TRUE)) {
data(dat.lehmann2018, package = "metadat")
fit <- bPET(yi = yi, vi = vi, data = dat.lehmann2018, measure = "SMD")
fit <- add_loo(fit)
cooks.distance(fit)
}
## End(Not run)
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