rhoScores: Calculate rho scores

In RobustRankAggreg: Methods for Robust Rank Aggregation

Calculate rho scores

Description

Calculate Rho score for normalized rank vector

Usage

rhoScores(r, topCutoff = NA, exact = FALSE)

Arguments

r	vector of values in [0, 1]
topCutoff	a vector of cutoff values used to limit the number of elements in the input lists
exact	indicator if exact p-values should be calculated (Warning: it is computationally unstable and does to give considerable gain)

Details

Takes in a vector with values in [0, 1]. Applies betaScores to the vector, takes the minimum of the beta scores and converts it to a valid p-value.

Value

A rho score for the normalized rank vector.

Author(s)

Raivo Kolde <[e-mail]>

References

Raivo Kolde, Sven Laur, Priit Adler, Jaak Vilo, Robust rank aggregation for gene list integration and meta-analysis, Bioinformatics, 2012,, https://doi.org/10.1093/bioinformatics/btr709

Examples

 rhoScores(c(runif(15)))
 rhoScores(c(runif(10), rbeta(5, 1, 50)))

RobustRankAggreg documentation built on Oct. 3, 2022, 5:05 p.m.