Files in SCORPIUS
Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data
MD5
NEWS.md
README.md
NAMESPACE
DESCRIPTION
R/trajectory_inference.R
R/plotting.R
R/data.R
R/gene_importances.R
R/scaling.R
R/dimensionality_reduction.R
R/package.R
R/extract_modules.R
R/dynwrap_integration.R
R/dummy_proofing.R
inst/CITATION
inst/doc/simulated-data.Rmd
inst/doc/anndata.R
inst/doc/ginhoux.R
inst/doc/simulated-data.html
inst/doc/ginhoux.Rmd
inst/doc/singlecellexperiment.html
inst/doc/singlecellexperiment.R
inst/doc/singlecellexperiment.Rmd
inst/doc/simulated-data.R
inst/doc/anndata.Rmd
inst/doc/ginhoux.html
inst/doc/anndata.html
inst/dynwrap/definition.yml
inst/dynwrap/run.R
inst/dynwrap/example.sh
build/vignette.rds
build/partial.rdb
tests/testthat.R
tests/testthat/test-extract_modules.R
tests/testthat/test-gene_importances.R
tests/testthat/test-data.R
tests/testthat/test-sparse.R
tests/testthat/test-trajectory_inference.R
tests/testthat/test-scaling.R
tests/testthat/test-dimensionality_reduction.R
vignettes/simulated-data.Rmd
vignettes/ginhoux.Rmd
vignettes/singlecellexperiment.Rmd
vignettes/anndata.Rmd
data/ginhoux.rda
man/ginhoux.Rd
man/reexports.Rd
man/reduce_dimensionality.Rd
man/SCORPIUS-package.Rd
man/gene_importances.Rd
man/draw_trajectory_heatmap.Rd
man/extract_modules.Rd
man/reverse_trajectory.Rd
man/infer_initial_trajectory.Rd
man/draw_trajectory_plot.Rd
man/ti_scorpius.Rd
man/generate_dataset.Rd
man/infer_trajectory.Rd
man/figures/README_infer_trajectory-1.png
man/figures/README_moduled_tafs-1.png
man/figures/README_visualise_tafs-1.png
man/figures/README_reduce_dimensionality-1.png
