Man pages for SCORPIUS
Inferring Developmental Chronologies from Single-Cell RNA Sequencing Data

deprecatedDeprecated evaluation functions
distanceDeprecated distance functions
draw_trajectory_heatmapDraw time-series heatmap
draw_trajectory_plotVisualise SCORPIUS
extract_modulesExtract modules of features
gene_importancesCalculate the importance of a feature
generate_datasetGenerate a synthetic dataset
ginhouxscRNA-seq data of dendritic cell progenitors.
infer_initial_trajectoryInfer an initial trajectory through space
infer_trajectoryInfer linear trajectory through space
knnk Nearest Neighbour indices and distances
knn_distancesk Nearest Neighbour distances
reduce_dimensionalityDimensionality reduction
reexportsObjects exported from other packages
reverse_trajectoryReverse a trajectory
SCORPIUS-packageSCORPIUS: Trajectory inference from single-cell RNA...
SCORPIUS documentation built on May 27, 2019, 5:03 p.m.