SCRIPsimGeneMeans: Simulate gene means
In SCRIP: An Accurate Simulator for Single-Cell RNA Sequencing Data
Description
Usage
Arguments
Value
Description
Simulate gene means from a gamma distribution. Also simulates outlier
expression factors. Genes with an outlier factor not equal to 1 are replaced
with the median mean expression multiplied by the outlier factor.
Usage
1
SCRIPsimGeneMeans(data, sim, params)
Arguments
data
raw dataset.
sim
SingleCellExperiment to add gene means to.
params
SplatParams object with simulation parameters.
Value
SingleCellExperiment with simulated gene means.
SCRIP documentation built on Nov. 19, 2021, 9:07 a.m.
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Description Usage Arguments Value
Description
Simulate gene means from a gamma distribution. Also simulates outlier expression factors. Genes with an outlier factor not equal to 1 are replaced with the median mean expression multiplied by the outlier factor.
Usage
1 | SCRIPsimGeneMeans(data, sim, params)
|
Arguments
data |
raw dataset. |
sim |
SingleCellExperiment to add gene means to. |
params |
SplatParams object with simulation parameters. |
Value
SingleCellExperiment with simulated gene means.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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