cplot: Subgraph mapping

In SEMgraph: Network Analysis and Causal Inference Through Structural Equation Modeling

Subgraph mapping

Description

Map groups of nodes onto an input graph, based on a membership vector.

Usage

cplot(graph, membership, l = layout.auto, map = FALSE, verbose = FALSE, ...)

Arguments

graph	An igraph object.
membership	Cluster membership vector for each node.
l	graph layout. One of the igraph layouts. If this argument is ignored, an automatic layout will be applied.
map	A logical value. Visualize cluster mapping over the input graph. If FALSE (default), visualization will be disabled. For large graphs, visualization may take long.
verbose	A logical value. If FALSE (default), the processed graphs will not be plotted to screen, saving execution time (they will be returned in output anyway).
...	Currently ignored.

Value

The list of clusters and cluster mapping as igraph objects.

Author(s)

Mario Grassi [e-mail]

See Also

clusterGraph, clusterScore

Examples

# Clustering ALS graph with WTC method
G <- alsData$graph
membership <- clusterGraph(graph = G, type = "wtc")
cplot(G, membership, map = TRUE, verbose = FALSE)
cplot(G, membership, map = FALSE, verbose = TRUE)
# The list of cluster graphs !
cg <- cplot(G, membership); cg

SEMgraph documentation built on Sept. 11, 2024, 8:36 p.m.