SHLR: Shared Haplotype Length Regression

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A statistical method designed to take advantage of population genetics and microevolutionary theory, specifically by testing the association between haplotype sharing length and trait of interest.

Author
Satria Sajuthi
Date of publication
2016-04-04 18:39:37
Maintainer
Satria Sajuthi <ssajuthi@wakehealth.edu>
License
GPL-3
Version
1.0

View on CRAN

Man pages

read.shapeit.haps
Helper function to read phased haplotypes produces by SHAPEIT
run.SHLR.scan
SHLR scan

Files in this package

SHLR
SHLR/inst
SHLR/inst/extdata
SHLR/inst/extdata/phased.haps
SHLR/inst/extdata/plink.fam
SHLR/NAMESPACE
SHLR/R
SHLR/R/functions.R
SHLR/MD5
SHLR/DESCRIPTION
SHLR/man
SHLR/man/read.shapeit.haps.Rd
SHLR/man/run.SHLR.scan.Rd