som.add.numbers: Add Neuron Numbering

In SOMMD: Self Organising Maps for the Analysis of Molecular Dynamics Data

Add Neuron Numbering

Description

Add the neuron numbering scheme to the SOM plot

Usage

som.add.numbers(SOM, scale = 1, col = "black")

Arguments

SOM	the SOM object
scale	a number to scale up or down the size of the text
col	the color of the text

Value

Called for its effect.

Author(s)

Stefano Motta [e-mail]

Examples

#Read example SOM data
som_model <- readRDS(system.file("extdata", "SOM_HIFa.rds", package = "SOMMD"))
#Plot the som
plot(som_model, type = "count", bgcol=c("red", "blue", "yellow", "green"), shape='straight')
#Add neuron numbers on the som
som.add.numbers(som_model, scale=0.5, col="black")

SOMMD documentation built on Oct. 2, 2024, 5:07 p.m.