stride.trj: Stride a trj
In SOMMD: Self Organising Maps for the Analysis of Molecular Dynamics Data
stride.trj R Documentation
Stride a trj
Description
Apply a stride to the frame of a trj object to reduce the number of frames
Usage
stride.trj(trj, stride)
Arguments
trj
a trj object.
stride
the stride to apply to the trajectory
Value
An object of class trj with a frame every stride
Author(s)
Stefano Motta stefano.motta@unimib.it
Examples
# Read the simulation
trj <- read.trj(trjfile = system.file("extdata", "HIF2a-MD.xtc", package = "SOMMD"),
topfile = system.file("extdata", "HIF2a.gro", package = "SOMMD"))
# keep a frame every 2 frame
trj_strd <- stride.trj(trj, 2)
SOMMD documentation built on Oct. 2, 2024, 5:07 p.m.
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| stride.trj | R Documentation |
Stride a trj
Description
Apply a stride to the frame of a trj object to reduce the number of frames
Usage
stride.trj(trj, stride)
Arguments
trj |
a trj object. |
stride |
the stride to apply to the trajectory |
Value
An object of class trj with a frame every stride
Author(s)
Stefano Motta stefano.motta@unimib.it
Examples
# Read the simulation
trj <- read.trj(trjfile = system.file("extdata", "HIF2a-MD.xtc", package = "SOMMD"),
topfile = system.file("extdata", "HIF2a.gro", package = "SOMMD"))
# keep a frame every 2 frame
trj_strd <- stride.trj(trj, 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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