R/RcppExports.R

In SPARSEMODr: SPAtial Resolution-SEnsitive Models of Outbreak Dynamics

# Generated by using Rcpp::compileAttributes() -> do not edit by hand
# Generator token: 10BE3573-1514-4C36-9D1C-5A225CD40393

covid19_model_interface <- function(input_dist_mat, input_N_pops, input_S_pops, input_E_pops, input_I_asym_pops, input_I_presym_pops, input_I_sym_pops, input_I_home_pops, input_I_hosp_pops, input_I_icu1_pops, input_I_icu2_pops, input_R_pops, input_D_pops, input_tw, input_realz_seeds, input_census_area = as.numeric( c()), stoch_sd = 0.05, trans_type = 1L, dd_trans_monod_k = 500, frac_beta_asym = 0.55, frac_beta_hosp = 0.05, delta = 1/3.0, recov_a = 1/6.0, recov_p = 1/2.0, recov_s = 1/6.0, recov_home = 1/3.0, recov_icu1 = 1/8.0, recov_icu2 = 1/4.0, asym_rate = 0.40, sym_to_icu_rate = 0.015) {
    .Call(`_SPARSEMODr_covid19_model_interface`, input_dist_mat, input_N_pops, input_S_pops, input_E_pops, input_I_asym_pops, input_I_presym_pops, input_I_sym_pops, input_I_home_pops, input_I_hosp_pops, input_I_icu1_pops, input_I_icu2_pops, input_R_pops, input_D_pops, input_tw, input_realz_seeds, input_census_area, stoch_sd, trans_type, dd_trans_monod_k, frac_beta_asym, frac_beta_hosp, delta, recov_a, recov_p, recov_s, recov_home, recov_icu1, recov_icu2, asym_rate, sym_to_icu_rate)
}

seir_model_interface <- function(input_dist_mat, input_N_pops, input_S_pops, input_E_pops, input_I_pops, input_R_pops, input_tw, input_realz_seeds, input_census_area = as.numeric( c()), stoch_sd = 0.05, trans_type = 1L, dd_trans_monod_k = 500, birth = 1/(75*365), incubate = 1/8.0, recov = 1/3.0) {
    .Call(`_SPARSEMODr_seir_model_interface`, input_dist_mat, input_N_pops, input_S_pops, input_E_pops, input_I_pops, input_R_pops, input_tw, input_realz_seeds, input_census_area, stoch_sd, trans_type, dd_trans_monod_k, birth, incubate, recov)
}