dsb_map_chimp_full: Data of the DsbMap for chimpanzees

Description Usage Format References See Also


A dataset containing all translated PRDM9-A type hotspots of Pratto et al. (2014) for chimpanzees. The translation was performed using liftOver of the UCSC Genome Browser from the human genome (hg19) to the chimpanzees genome (panTro5).




The data set contains 64078 rows and 3 columns. We provide information on the columns (column nr, column name) hereafter:

1, chrom

The chromosome under study

2, start

Start coordinates of the hotspot

3, end

End coordinates of the hotspot


Heissl, A., et al. (2018) Length asymmetry and heterozygosity strongly influences the evolution of poly-A microsatellites at meiotic recombination hotspots. doi: https://doi.org/10.1101/431841

Pratto, F., et al. (2014). Recombination initiation maps of individual human genomes. Science, 346(6211).

Kuhn RM, et al. (2013) The UCSC genome browser and associated tools, Brief. Bioinform., 14, 144-161.

See Also

STR_analysis, STR_detection

STRAH documentation built on May 2, 2019, 11:03 a.m.