SYNCSA: SYNCSA - Analysis of functional and phylogenetic patterns in metacommunities.
Version 1.3.2

Analysis of metacommunities based on functional traits and phylogeny of the community components. The functions that are offered here implement for the R environment methods that have been available in the SYNCSA application written in C++ (by Valerio Pillar, available at http://ecoqua.ecologia.ufrgs.br/ecoqua/SYNCSA.html).

AuthorVanderlei Julio Debastiani
Date of publication2014-02-07 16:41:09
MaintainerVanderlei Julio Debastiani <vanderleidebastiani@yahoo.com.br>
LicenseGPL-2
Version1.3.2
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("SYNCSA")

Getting started

Package overview

Popular man pages

belonging: Degree of belonging of species
cent.norm: Matrix centralization and standardization
cor.matrix: Function to obtain the correlation between two matrices.
cor.matrix.partial: Function to obtain the partial matrix correlation between...
matrix.x: Matrix X
rao.diversity: Rao's quadratic entropy
SYNCSA-package: SYNCSA - Analysis of functional and phylogenetic patterns in...
See all...

All man pages Function index File listing

Man pages

belonging: Degree of belonging of species
cent.norm: Matrix centralization and standardization
cor.matrix: Function to obtain the correlation between two matrices.
cor.matrix.partial: Function to obtain the partial matrix correlation between...
flona: Hypothetical data for SYNCSA
matrix.p: Matrix P
matrix.t: Matrix T
matrix.x: Matrix X
optimal: Searching for optimal traits
organize.syncsa: Function for organize data for Package SYNCSA
permut.row.matrix: Permutate rows in a matrix
ProgressBAR: Text Progress Bar
rao.diversity: Rao's quadratic entropy
syncsa: Syncsa
SYNCSA-package: SYNCSA - Analysis of functional and phylogenetic patterns in...

Functions

ProgressBAR Man page Source code
SYNCSA Man page
SYNCSA-package Man page
belonging Man page Source code
cent.norm Man page Source code
cor.matrix Man page Source code
cor.matrix.partial Man page Source code
flona Man page
matrix.p Man page Source code
matrix.t Man page Source code
matrix.x Man page Source code
optimal Man page Source code
organize.syncsa Man page Source code
permut.row.matrix Man page Source code
rao.diversity Man page Source code
syncsa Man page Source code

Files

inst
inst/CITATION
NAMESPACE
data
data/flona.rda
R
R/cor.matrix.R
R/matrix.x.R
R/organize.syncsa.R
R/matrix.p.R
R/permut.row.matrix.R
R/matrix.t.R
R/syncsa.R
R/belonging.R
R/optimal.R
R/cor.matrix.partial.R
R/cent.norm.R
R/ProgressBAR.R
R/rao.diversity.R
MD5
DESCRIPTION
man
man/flona.Rd
man/cor.matrix.Rd
man/rao.diversity.Rd
man/syncsa.Rd
man/SYNCSA-package.Rd
man/permut.row.matrix.Rd
man/matrix.t.Rd
man/cent.norm.Rd
man/organize.syncsa.Rd
man/belonging.Rd
man/matrix.p.Rd
man/matrix.x.Rd
man/cor.matrix.partial.Rd
man/ProgressBAR.Rd
man/optimal.Rd
SYNCSA documentation built on May 19, 2017, 6:28 p.m.

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