parseProgenesisPeptideMeasurementCsv: Parse Progenesis Peptide Measurement Csv Export

In SafeQuant: A Toolbox for the Analysis of Proteomics Data

Description

Parse Progenesis Peptide Measurement Csv Export

Usage

parseProgenesisPeptideMeasurementCsv(file, expDesign = expDesign,
  method = "auc",
  expressionColIndices = .getProgenesisCsvExpressionColIndices(file, method =
  method), uniqueProteins = F)

Arguments

file	path to Progenesis Peptide Measurement csv file
expDesign	experimental design data.frame
method	auc (area under curve) or spc (spectral count)
expressionColIndices	default .getProgenesisCsvExpressionColIndices()
uniqueProteins	T/F keep unique peptides only

Details

No details

Value

ExpressionSet object

Note

No note

References

NA

See Also

ExpressionSet

Examples

print("No examples")

Example output

[1] "No examples"

SafeQuant documentation built on May 2, 2019, 4:53 a.m.