summary.selectboost: Summarize a selectboost analysis

In SelectBoost: A General Algorithm to Enhance the Performance of Variable Selection Methods in Correlated Datasets

Summarize a selectboost analysis

Description

Summarize a selectboost analysis.

Usage

## S3 method for class 'selectboost'
summary(
  object,
  crit.func = mean,
  crit.int = "mean",
  custom.values.lim = NULL,
  index.lim = NULL,
  alpha.conf.level = 0.99,
  force.dec = TRUE,
  ...
)

Arguments

object	Numerical matrix. Result of selectboost (autoboost, fastboost, ...).
crit.func	Function . Defaults to the mean function.
crit.int	Character value. Mean or median based confidence intervals. Defaults to "mean" based confidence intervals.
custom.values.lim	Vector of numeric values. Defults to NULL.
index.lim	Vector of numeric values. Defults to NULL.
alpha.conf.level	Numeric value. Defults to 0.99.
force.dec	Boolean. Force trajectories to be non-increasing.
...	Additionnal arguments. Passed to the crit.func function.

Details

summary.selectboost returns a list with the results.

Value

A list with the results.

Author(s)

Frederic Bertrand, [e-mail]

References

selectBoost: a general algorithm to enhance the performance of variable selection methods in correlated datasets, Frédéric Bertrand, Ismaïl Aouadi, Nicolas Jung, Raphael Carapito, Laurent Vallat, Seiamak Bahram, Myriam Maumy-Bertrand, Bioinformatics, 2020. doi: 10.1093/bioinformatics/btaa855

See Also

fastboost, autoboost

Other Selectboost analyse functions: force.non.inc(), plot.selectboost()

Examples

data(autoboost.res.x)
summary(autoboost.res.x)
summary(autoboost.res.x, force.dec=FALSE)

data(autoboost.res.x.adapt)
summary(autoboost.res.x.adapt)

data(autoboost.res.x2)
summary(autoboost.res.x2)
summary(autoboost.res.x2, force.dec=FALSE)

data(autoboost.res.x2.adapt)
summary(autoboost.res.x2.adapt)

data(fastboost.res.x)
summary(fastboost.res.x)
summary(fastboost.res.x, force.dec=FALSE)

data(fastboost.res.x.adapt)
summary(fastboost.res.x.adapt)

data(fastboost.res.x2)
summary(fastboost.res.x2)
summary(fastboost.res.x2, force.dec=FALSE)

data(fastboost.res.x2.adapt)
summary(fastboost.res.x2.adapt)

SelectBoost documentation built on Dec. 1, 2022, 1:27 a.m.