SeqMADE: Network Module-Based Model in the Differential Expression Analysis for RNA-Seq

A network module-based generalized linear model for differential expression analysis with the count-based sequence data from RNA-Seq.

AuthorMingli Lei, Jia Xu, Li-Ching Huang, Lily Wang, Jing Li
Date of publication2016-06-27 06:59:54
MaintainerMingli Lei<leimingli2013@sjtu.edu.cn>
LicenseGPL (>= 2)
Version1.0

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Files in this package

SeqMADE
SeqMADE/NAMESPACE
SeqMADE/data
SeqMADE/data/networkModule.txt.gz
SeqMADE/data/exprs.txt.gz
SeqMADE/R
SeqMADE/R/SeqMADE.r
SeqMADE/MD5
SeqMADE/DESCRIPTION
SeqMADE/man
SeqMADE/man/moduleMatrix.Rd SeqMADE/man/nbGLM.Rd SeqMADE/man/nbGLMdirperm.Rd SeqMADE/man/nbGLMdir.Rd SeqMADE/man/SeqMADE-package.Rd SeqMADE/man/Factor.Rd SeqMADE/man/networkModule.Rd SeqMADE/man/exprs.Rd

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