SequenceAnalysis.CodonUsage: SequenceAnalysis.CodonUsage
In SequenceAnalysis: Sequence Analysis
Description
Usage
Arguments
Details
Value
Author(s)
Examples
Description
Frequency of occurrence of synonymous codons
Usage
1
SequenceAnalysis.CodonUsage(Nucleotide_Sequence = NULL, UniprotKB = NULL)
Arguments
Nucleotide_Sequence
Nucleotide Sequence
UniprotKB
UniProt ID of desired sequence
Details
Codon Usage will be calculated for input sequence or by passing UniProt ID it will catch the sequence online from UniProt database and then calculate Codon Usage for it.
Value
CodonUsage
Author(s)
Babak Khorsand
Examples
1
2
SequenceAnalysis.CodonUsage(Nucleotide_Sequence="atggctgcagcggccagtcacgatcagaggtaagttgtc")
SequenceAnalysis.CodonUsage(UniprotKB="O15131")
SequenceAnalysis documentation built on May 30, 2017, 8 a.m.
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Description Usage Arguments Details Value Author(s) Examples
Description
Frequency of occurrence of synonymous codons
Usage
1 | SequenceAnalysis.CodonUsage(Nucleotide_Sequence = NULL, UniprotKB = NULL)
|
Arguments
Nucleotide_Sequence |
Nucleotide Sequence |
UniprotKB |
UniProt ID of desired sequence |
Details
Codon Usage will be calculated for input sequence or by passing UniProt ID it will catch the sequence online from UniProt database and then calculate Codon Usage for it.
Value
CodonUsage
Author(s)
Babak Khorsand
Examples
1 2 | SequenceAnalysis.CodonUsage(Nucleotide_Sequence="atggctgcagcggccagtcacgatcagaggtaagttgtc")
SequenceAnalysis.CodonUsage(UniprotKB="O15131")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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