Man pages for ShiVa
Detection of Evolutionary Shifts in Both Optimal Value and Variance

backward_correctionBackward Selection for OU Model Shift Correction
fit_OU_mean_varFit OU Model with Shifts in Mean and Variance
generate_design_matrixGenerate Design Matrix
get_mean_var_shiftsEstimate Shifts in Optimal Trait Values and Variance
get_mean_var_shifts_model_selectionModel Selection for OU Shifts in Optimal value and Variance
OU.vcvOU.vcv
plot.ShiftModelPlot Method for ShiftModel Objects
print.summary.ShiftModelPrint Method for Summary of ShiftModel
ShiVaShiVa: Automatic Shift Detection in Mean and Variance
soft_thresholdingSoft Thresholding
summary.ShiftModelSummary of a ShiVa Shift Model
update_step_gammaUpdate Step for Gamma
ShiVa documentation built on Aug. 22, 2025, 9:14 a.m.