get.noise.var: Suggestion noise

Description Usage Arguments Value Author(s) Examples

Description

Give suggestion on the parameter setting of noise variance according to the expected heritability.

Usage

1
get.noise.var(gene.coef, freq, heritability, Dskim = 0, ...)

Arguments

gene.coef

a list including the coefficients of genetic effects. Each element includes 8 genetic parameters (regression coefficient) β_{Gw_{t}}, t in (1, 2, ..., 8)

freq

a dataframe with the allele frequencies.

heritability

expected heritability.

Dskim

the coefficient of linkage disequilibrium. Default is 0 (no LD).

...

not used.

Value

variance of noise to generate the random noise.

Author(s)

Beibei Jiang beibei_jiang@psych.mpg.de

Examples

1

SimPhe documentation built on May 1, 2019, 9:10 p.m.