SimReg: Similarity Regression

Functions for performing Bayesian similarity regression, and evaluating the probability of association between sets of ontological terms and binary response vector. A random model is compared with one in which the log odds of a true response is linked to the semantic similarity between terms and a latent characteristic ontological profile.

AuthorDaniel Greene
Date of publication2016-10-15 18:51:56
MaintainerDaniel Greene <dg333@cam.ac.uk>
LicenseGPL (>= 2)
Version3.0

View on CRAN

Files in this package

SimReg
SimReg/inst
SimReg/inst/doc
SimReg/inst/doc/SimReg-Introduction.R
SimReg/inst/doc/SimReg-Priors.html
SimReg/inst/doc/SimReg-Priors.Rmd
SimReg/inst/doc/SimReg-Introduction.html
SimReg/inst/doc/SimReg-Introduction.Rmd
SimReg/inst/doc/SimReg-Priors.R
SimReg/src
SimReg/src/fml.cpp
SimReg/src/bgml.cpp
SimReg/src/ml.cpp
SimReg/src/utils.h
SimReg/src/RcppExports.cpp
SimReg/NAMESPACE
SimReg/R
SimReg/R/generic.R SimReg/R/plot.R SimReg/R/phi-priors.R SimReg/R/ml.R SimReg/R/inference.R SimReg/R/RcppExports.R SimReg/R/pick.R
SimReg/vignettes
SimReg/vignettes/SimReg-Priors.Rmd
SimReg/vignettes/SimReg-Introduction.Rmd
SimReg/MD5
SimReg/build
SimReg/build/vignette.rds
SimReg/DESCRIPTION
SimReg/man
SimReg/man/print.sim_reg_summary.Rd SimReg/man/get_term_marginals.Rd SimReg/man/log_BF.Rd SimReg/man/SimReg-package.Rd SimReg/man/term_marginals.Rd SimReg/man/prob_association.Rd SimReg/man/plot.sim_reg_summary.Rd SimReg/man/print.sim_reg_output.Rd SimReg/man/sim_reg.Rd SimReg/man/get_terms.Rd SimReg/man/sum_log_probs.Rd SimReg/man/plot_term_marginals.Rd SimReg/man/summary.sim_reg_output.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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