tests/testthat/_snaps/groupGenerics.md

In SomaDataIO: Input/Output 'SomaScan' Data

the Ops() group generic generates the expected output

Code
  expect_error(adat == adat, NA)
Output
  == Checking ADAT attributes & characteristics ==================================
Message
  > Attribute names are identical       v
  > Attributes are identical            v
  > ADAT dimensions are identical       v
  > ADAT row names are identical        v
  > ADATs contain identical Features    v
  > ADATs contain same Meta Fields      v
Output
  -- Checking the data matrix ----------------------------------------------------
Message
  > All Clinical data is identical      v
  > All Feature data is identical       v
Output
  ================================================================================

error conditions generate the expected output for deprecated soma.adat

Code
  readLines(catfile)
Output
  [1] "The 'soma.adat' class is now 'soma_adat' ."                                
  [2] " Please either:"                                                           
  [3] "   1) Re-class with x <- addClass(x, 'soma_adat')"                         
  [4] "   2) Re-call 'x <- read_adat(file)' to pick up the new 'soma_adat' class."

SomaDataIO documentation built on April 4, 2025, 2:14 a.m.