R/potato.mini.R

In StAMPP: Statistical Analysis of Mixed Ploidy Populations

#' Smaller example genotype input format
#'
#' A data frame containing Solcap potato genotype data in tetraploid and diploid format as an small example of the input format required by StAMPP
#'
#' @format A data frame with 6 rows and 48 variables:
#' \describe{
#'   \item{Sample}{Sample names}
#'   \item{Pop}{Population name}
#'   \item{Ploidy}{Ploidy level}
#'   \item{Format}{Format of genotype data}
#'   \item{solcap_snp_c1_1}{genotype data}
#'   \item{solcap_snp_c1_1000}{genotype data}
#'   \item{solcap_snp_c1_10000}{genotype data}
#'   \item{solcap_snp_c1_10001}{genotype data}
#'   \item{solcap_snp_c1_10011}{genotype data}
#'   \item{solcap_snp_c1_10012}{genotype data}
#'   \item{solcap_snp_c1_10031}{genotype data}
#'   \item{solcap_snp_c1_10042}{genotype data}
#'   \item{solcap_snp_c1_10050}{genotype data}
#'   \item{solcap_snp_c1_10054}{genotype data}
#'   \item{solcap_snp_c1_10109}{genotype data}
#'   \item{solcap_snp_c1_10130}{genotype data}
#'   \item{solcap_snp_c1_10157}{genotype data}
#'   \item{solcap_snp_c1_10202}{genotype data}
#'   \item{solcap_snp_c1_10252}{genotype data}
#'   \item{solcap_snp_c1_10253}{genotype data}
#'   \item{solcap_snp_c1_10255}{genotype data}
#'   \item{solcap_snp_c1_1029}{genotype data}
#'   \item{solcap_snp_c1_10295}{genotype data}
#'   \item{solcap_snp_c1_10297}{genotype data}
#'   \item{solcap_snp_c1_10351}{genotype data}
#'   \item{solcap_snp_c1_10384}{genotype data}
#'   \item{solcap_snp_c1_10397}{genotype data}
#'   \item{solcap_snp_c1_10457}{genotype data}
#'   \item{solcap_snp_c1_10491}{genotype data}
#'   \item{solcap_snp_c1_10492}{genotype data}
#'   \item{solcap_snp_c1_10494}{genotype data}
#'   \item{solcap_snp_c1_10579}{genotype data}
#'   \item{solcap_snp_c1_10646}{genotype data}
#'   \item{solcap_snp_c1_10669}{genotype data}
#'   \item{solcap_snp_c1_10715}{genotype data}
#'   \item{solcap_snp_c1_10737}{genotype data}
#'   \item{solcap_snp_c1_10743}{genotype data}
#'   \item{solcap_snp_c1_10762}{genotype data}
#'   \item{solcap_snp_c1_10855}{genotype data}
#'   \item{solcap_snp_c1_10873}{genotype data}
#'   \item{solcap_snp_c1_10879}{genotype data}
#'   \item{solcap_snp_c1_10900}{genotype data}
#'   \item{solcap_snp_c1_10932}{genotype data}
#'   \item{solcap_snp_c1_1094}{genotype data}
#'   \item{solcap_snp_c1_11137}{genotype data}
#'   \item{solcap_snp_c1_11144}{genotype data}
#'   \item{solcap_snp_c1_11196}{genotype data}
#'   \item{solcap_snp_c1_11206}{genotype data}
#' }
#' @usage data(potato.mini)
#' @source The example genotype data is a subset of data from the publically avaliable Solcap potato dataset \url{http://solcap.msu.edu/potato_infinium.shtml} which was re-scored in GenomeStudio in diploid and tetraploid formats
"potato.mini"