Description Usage Arguments Value References Examples
Provides random walk procedure. Starting from the randomly selected node, choose a neighbour node uniformly randomly, until given number of terminals won't be found.
1 | generate_st_samples(graph, ter_number, prob)
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graph |
an igraph graph; should be undirected, otherwise it is converted to undirected. |
ter_number |
a numeric vector; each element indicates the number of terminals to be selected and length of vector indicates the number of terminal sets to be picked. |
prob |
a numeric vector of the same length as ter_number; prob[i] defines a probability with which each next node accepted or rejected while selecting ter_number[i] terminals. |
A list of the same length as ter_number. Each element of list contains a vector of ids of selected vertices.
1. Afshin Sadeghi and Holger Froehlich, "Steiner tree methods for optimal sub-network identification: an empirical study", BMC Bioinformatics 2013 14:144
1 2 3 | generate_st_samples(graph = graph("Zachary"),
ter_number = c(3, 4),
prob = c(0.1, 0.2))
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