generate.geno.matrix: Generate genotype matrix for given number of mutations.

Description Usage Arguments Details Value See Also Examples

View source: R/simulate_data_fnxs.R

Description

Generate genotype matrix for given number of mutations.

Usage

1

Arguments

n

Number of mutations.

Details

Used when simulating data for a complete network. Generally called internally during simulations to create matrix for which fitness values will then be simulated. Minimum value of n is 2.

Value

Matrix with all genotypes made of n mutations. Each column is a mutation (0=absent, 1=present), rows are genotypes.

See Also

sim.stick.data

Examples

1

Example output

      mut.1 mut.2 mut.3 mut.4 mut.5
 [1,]     0     0     0     0     0
 [2,]     1     0     0     0     0
 [3,]     0     1     0     0     0
 [4,]     1     1     0     0     0
 [5,]     0     0     1     0     0
 [6,]     1     0     1     0     0
 [7,]     0     1     1     0     0
 [8,]     1     1     1     0     0
 [9,]     0     0     0     1     0
[10,]     1     0     0     1     0
[11,]     0     1     0     1     0
[12,]     1     1     0     1     0
[13,]     0     0     1     1     0
[14,]     1     0     1     1     0
[15,]     0     1     1     1     0
[16,]     1     1     1     1     0
[17,]     0     0     0     0     1
[18,]     1     0     0     0     1
[19,]     0     1     0     0     1
[20,]     1     1     0     0     1
[21,]     0     0     1     0     1
[22,]     1     0     1     0     1
[23,]     0     1     1     0     1
[24,]     1     1     1     0     1
[25,]     0     0     0     1     1
[26,]     1     0     0     1     1
[27,]     0     1     0     1     1
[28,]     1     1     0     1     1
[29,]     0     0     1     1     1
[30,]     1     0     1     1     1
[31,]     0     1     1     1     1
[32,]     1     1     1     1     1

Stickbreaker documentation built on May 29, 2017, 9:01 a.m.