SurvRank: Rank Based Survival Modelling

Estimation of the prediction accuracy in a unified survival AUC approach. Model selection and prediction estimation based on a survival AUC. Stepwise model selection, based on several ranking approaches.

AuthorMichael Laimighofer [aut, cre, ctb]
Date of publication2015-08-26 14:22:13
MaintainerMichael Laimighofer <michael.laimighofer@helmholtz-muenchen.de>
LicenseGPL-2
Version0.1

View on CRAN

Man pages

crossvalFolds: Creating stratified cross validation folds

CVrankSurv_fct: Main function of SurvRank.

fin_surv_model_fct: Building the final survRank model

fixRank_fct: Wrapper function using f as ranking method

fsRankBoostAUC_fct: Wrapper function using additive models with component-wise...

fsRankConcAUC_fct: Wrapper function using the concordance measure as ranking...

fsRankCoxAUC_fct: Wrapper function using the univariate Cox models as ranking...

fsRankLassoAUC_fct: Wrapper function using the L1 norm (lasso) as ranking method

fsRankMonsterAUC_fct: Wrapper function using cox models with randomly selected nmax...

fsRankRfAUC_fct: Wrapper function using the random forests as ranking method

fsRankRpartAUC_fct: Wrapper function using recursive partitioning and regression...

fsRankWangAUC_fct: Wrapper function using univariate cox models for a randomly...

fsSurvRankBoost: Boost ranking function

fsSurvRankConc: Concordance ranking function

fsSurvRankCox: Cox ranking function

fsSurvRankGlmnet: L1 (lasso) ranking function

fsSurvRankRandCox: Random Cox ranking function

fsSurvRankRf: Random forest ranking function

fsSurvRankRpart: Rpart ranking function

fsSurvRankWang: Random Cox ranking function

glmnetRank: Ranks features of a previously fitted 'glmnet' object

innerAUC_fct: Calculates inner and outer survival AUCs of training and...

msSurv_fct: Function selects for the ranking function approaches

plot_CVsurv: Main function of SurvRank

risk_newdat: Main function of SurvRank.

riskscore_fct: Main function of SurvRank.

weighting_fct: Weigthing function for selected features

Files in this package

SurvRank
SurvRank/inst
SurvRank/inst/doc
SurvRank/inst/doc/SurvRank.html
SurvRank/inst/doc/SurvRank.Rmd
SurvRank/NAMESPACE
SurvRank/R
SurvRank/R/risk_newdat.R SurvRank/R/riskscore_fct.R SurvRank/R/fsRankCoxAUC_fct.R SurvRank/R/fsSurvRankGlmnet.R SurvRank/R/innerAUC_fct.R SurvRank/R/msSurv_fct.R SurvRank/R/fsRankMonsterAUC_fct.R SurvRank/R/fsSurvRankConc.R SurvRank/R/fsRankRfAUC_fct.R SurvRank/R/SurvRank-package.R SurvRank/R/plot_CVsurv.R SurvRank/R/fixRank_fct.R SurvRank/R/crossvalFolds.R SurvRank/R/weigthing_fct.R SurvRank/R/fsSurvRankBoost.R SurvRank/R/fsRankLassoAUC_fct.R SurvRank/R/fsSurvRankRpart.R SurvRank/R/fin_surv_model_fct.R SurvRank/R/fsSurvRankRf.R SurvRank/R/glmnetRank.R SurvRank/R/fsSurvRankCox.R SurvRank/R/fsSurvRankWang.R SurvRank/R/fsRankConcAUC_fct.R SurvRank/R/fsRankWangAUC_fct.R SurvRank/R/fsRankBoostAUC_fct.R SurvRank/R/CVrankSurv_fct.R SurvRank/R/fsSurvRankRandCox.R SurvRank/R/fsRankRpartAUC_fct.R
SurvRank/vignettes
SurvRank/vignettes/SurvRank.Rmd
SurvRank/MD5
SurvRank/build
SurvRank/build/vignette.rds
SurvRank/DESCRIPTION
SurvRank/man
SurvRank/man/fsSurvRankBoost.Rd SurvRank/man/fixRank_fct.Rd SurvRank/man/fsRankCoxAUC_fct.Rd SurvRank/man/crossvalFolds.Rd SurvRank/man/fsRankRfAUC_fct.Rd SurvRank/man/msSurv_fct.Rd SurvRank/man/fsSurvRankRpart.Rd SurvRank/man/glmnetRank.Rd SurvRank/man/fsSurvRankConc.Rd SurvRank/man/fsSurvRankCox.Rd SurvRank/man/fsRankBoostAUC_fct.Rd SurvRank/man/fsSurvRankGlmnet.Rd SurvRank/man/fsSurvRankWang.Rd SurvRank/man/weighting_fct.Rd SurvRank/man/fsRankWangAUC_fct.Rd SurvRank/man/fsRankLassoAUC_fct.Rd SurvRank/man/fin_surv_model_fct.Rd SurvRank/man/fsRankConcAUC_fct.Rd SurvRank/man/innerAUC_fct.Rd SurvRank/man/riskscore_fct.Rd SurvRank/man/risk_newdat.Rd SurvRank/man/CVrankSurv_fct.Rd SurvRank/man/plot_CVsurv.Rd SurvRank/man/fsRankRpartAUC_fct.Rd SurvRank/man/fsSurvRankRf.Rd SurvRank/man/fsRankMonsterAUC_fct.Rd SurvRank/man/fsSurvRankRandCox.Rd

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