In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, we are interested in the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. It is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15. <doi:10.1186/1748-7188-2-15>.
Package details |
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Author | Ge Tan <ge_tan@live.com> |
Maintainer | Ge Tan <ge_tan@live.com> |
License | GPL-2 |
Version | 0.0.9 |
URL | https://github.com/ge11232002/TFMPvalue |
Package repository | View on CRAN |
Installation |
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