TFMPvalue: Efficient and Accurate P-Value Computation for Position Weight Matrices
Version 0.0.8

In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, we are interested in the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. It is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15. Touzet and Varre (2007) .

Package details

AuthorGe Tan <[email protected]>
Date of publication2018-05-16 08:03:38 UTC
MaintainerGe Tan <[email protected]>
LicenseGPL-2
Version0.0.8
URL https://github.com/ge11232002/TFMPvalue
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("TFMPvalue")

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TFMPvalue documentation built on May 16, 2018, 9:03 a.m.