In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, we are interested in the significance of certain match score. TFMPvalue provides the accurate calculation of Pvalue with score threshold for Position Weight Matrices, or the score with given Pvalue. This package is an interface to code originally made available by Helene Touzet and JeanStephane Varre, 2007, Algorithms Mol Biol:2, 15.
Package details 


Author  Ge Tan <[email protected]> 
Date of publication  20151129 19:19:46 
Maintainer  Ge Tan <[email protected]> 
License  GPL2 
Version  0.0.6 
URL  https://github.com/ge11232002/TFMPvalue 
Package repository  View on CRAN 
Installation 
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