Files in TGS

Rapid Reconstruction of Time-Varying Gene Regulatory Networks

NEWS.md

MD5

README.md

NAMESPACE

DESCRIPTION

build/vignette.rds

R/calcPerfDiNet.R R/genTrueNetFunc.R R/CondMutualInfo.R R/learnDbnStruct3dParDeg1.R R/CompareNet.R R/learnCmiNetStruct.R R/learn_mi_net_struct.R R/count_feed_fwd_edges_undi.R R/checkUnrolledDbn.R R/TGS-package.R R/convert_dinet_to_undinet.R R/discretizeData.R R/rollDbn.R R/graphFns.R R/compute_cmi.R R/RDataToCytoscape.R R/learn_TGS.R vignettes/chap_01_QuickStartGuide.Rmd man/TGS-package.Rd man/LearnTgs.Rd tests/testthat.R tests/testthat/test-Ds10n.R tests/testthat/test-Ed10n.R inst/doc/chap_01_QuickStartGuide.Rmd

inst/doc/chap_01_QuickStartGuide.html

inst/doc/chap_01_QuickStartGuide.R

inst/extdata/edi.net.10.adj.mx.RData

inst/extdata/InSilicoSize10-Yeast1-trajectories.tsv

inst/extdata/input.DmLc3P.json

inst/extdata/DREAM3GoldStandard_InSilicoSize10_Yeast1_TrueNet.RData

inst/extdata/DmLc3L.RData

inst/extdata/input.DmLc3E.json

inst/extdata/DmLc3A.RData

inst/extdata/edi-data-10n.tsv

inst/extdata/input.DmLc3L.json

inst/extdata/Result_Ed10n.RData

inst/extdata/Result_Ds10n.RData

inst/extdata/DmLc3P.RData

inst/extdata/InSilicoSize10-Yeast1-null-mutants.tsv

inst/extdata/input.DmLc3A.json

inst/extdata/DmLc3E.RData

inst/extdata/Output_Ds10n/mi.net.adj.matrix.RData

inst/extdata/Output_Ds10n/sessionInfo.txt

inst/extdata/Output_Ds10n/di.net.adj.matrix.RData

inst/extdata/Output_Ds10n/mi.net.adj.matrix.wt.RData

inst/extdata/Output_Ds10n/Result.RData

inst/extdata/Output_Ds10n/net.sif

inst/extdata/Output_Ds10n/mut.info.matrix.RData

inst/extdata/Output_Ds10n/input.data.discr.RData

inst/extdata/Output_Ds10n/output.txt

inst/extdata/Output_Ds10n/unrolled.DBN.adj.matrix.list.RData

inst/extdata/Output_Ed10n/mi.net.adj.matrix.RData

inst/extdata/Output_Ed10n/sessionInfo.txt

inst/extdata/Output_Ed10n/di.net.adj.matrix.RData

inst/extdata/Output_Ed10n/mi.net.adj.matrix.wt.RData

inst/extdata/Output_Ed10n/Result.RData

inst/extdata/Output_Ed10n/net.sif

inst/extdata/Output_Ed10n/mut.info.matrix.RData

inst/extdata/Output_Ed10n/input.data.discr.RData

inst/extdata/Output_Ed10n/output.txt

inst/extdata/Output_Ed10n/unrolled.DBN.adj.matrix.list.RData

TGS documentation built on July 1, 2020, 10:23 p.m.