sumKinSpecEst: Makes a summary plot of spectra associated with kinetic...

In TIMP: Fitting Separable Nonlinear Models in Spectroscopy and Microscopy

Makes a summary plot of spectra associated with kinetic components alongside a plot showing parameter estimates

Description

Makes a summary plot of spectra associated with kinetic components alongside a plot showing parameter estimates for, by default, kinetic parameters. If the analysis had more parameters in the addEst slot of the argument opt, then more parameters are displayed. Note that this summary leaves out the spectra associated with coherent artifact or scatter.

Usage

sumKinSpecEst(listFits, addtitle = TRUE, customtitle = "", preps = "",
ylimlist=list(), kinspecerr=TRUE)

Arguments

listFits	list of objects returned by the fitModel function
addtitle	logical regarding whether to add a title; if TRUE and customtitle is not given then the title is "Summary of EADS for: " plus the analysis titles
customtitle	character vector containing a title
preps	character vector describing the prefix of the postscript filename given as output
ylimlist	list with elements list(ind, ylim). ind is an index into listFits; ylim is the desired ylim for the plot for that analysis
kinspecerr	logical regarding whether to add error bars for to the estimated spectra.

Details

This looks best with less than five objects in listFits.

Value

No return value, called for side effects

Author(s)

Katharine M. Mullen, Ivo H. M. van Stokkum

See Also

fitModel, examineFit

TIMP documentation built on Dec. 28, 2022, 3:06 a.m.