Tropical.HC.AGNES: Agglomerative (AGNES) tropical hierarchical clustering

In TML: Tropical Geometry Tools for Machine Learning

Agglomerative (AGNES) tropical hierarchical clustering

Description

This function performs agglomerative (AGNES) hierarchical clustering over the space of ultrametrics defining the space of equidistant trees

Usage

Tropical.HC.AGNES(D, method = mean)

Arguments

D	matrix of points defining a tropical polytope. Rows are the tropical points
method	linkage method: mean, min, or max

Value

list of distances in when merges occur; list of indices of points in each cluster

Author(s)

David Barnhill [e-mail]

References

David Barnhill, Ruriko Yoshida (2023). Clustering Methods Over the Tropically Convex Sets.

Examples

P <-Sim_points
Tropical.HC.AGNES(P, method=mean)

TML documentation built on Sept. 11, 2024, 6:19 p.m.