vector.to.equidistant.tree: Vector to equidistant tree
In TML: Tropical Geometry Tools for Machine Learning
View source: R/vector.to.equidistant.tree.R
vector.to.equidistant.tree R Documentation
Vector to equidistant tree
Description
A vector of pairwise distances is used to reconstruct the corresponding equidistant tree
Usage
vector.to.equidistant.tree(vec)
Arguments
vec
vector of pairwise distances in R^(m choose 2), where m is the number of leaves
Value
equidistant phylogenetic tree
Author(s)
Georgios Aliatimis g.aliatimis@lancaster.ac.uk
References
Aliatimis, Georgios, Ruriko Yoshida, Burak Boyaci and James A. Grant (2023). Tropical Logistic Regression on Space of Phylogenetic Trees
Examples
vec = c(1/3,1,1,1,1,1/3)
tree = vector.to.equidistant.tree(vec)
plot(tree)
TML documentation built on Sept. 11, 2024, 6:19 p.m.
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View source: R/vector.to.equidistant.tree.R
| vector.to.equidistant.tree | R Documentation |
Vector to equidistant tree
Description
A vector of pairwise distances is used to reconstruct the corresponding equidistant tree
Usage
vector.to.equidistant.tree(vec)
Arguments
vec |
vector of pairwise distances in R^(m choose 2), where m is the number of leaves |
Value
equidistant phylogenetic tree
Author(s)
Georgios Aliatimis g.aliatimis@lancaster.ac.uk
References
Aliatimis, Georgios, Ruriko Yoshida, Burak Boyaci and James A. Grant (2023). Tropical Logistic Regression on Space of Phylogenetic Trees
Examples
vec = c(1/3,1,1,1,1,1/3)
tree = vector.to.equidistant.tree(vec)
plot(tree)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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