demo.samples: Demonstration Samples Database

In TRAMPR: 'TRFLP' Analysis and Matching Package for R

Description

A samples database, for demonstrating the TRAMPR package. This is a subset of a full samples database, is not intended to represent any real data set, and should not be assumed to be accurate.

The data are stored as a TRAMPsamples object. Columns in the info and data components are described on the TRAMPsamples page, but with some additions:

• info:

  • soilcore.fk: Key to the soil core from which a sample came. See soilcore, below.

• data:

  • sample.file.name: Original .fsa file corresponding to the TRFLP run. This is included in all TRAMPsamples objects created by load.abi.

• soilcore: A data.frame with information about the soilcore from which samples came.

  • soilcore.pk: Key, distinguishing soil cores.

  • plot: Plot number (1 to 10).

  • elevation: Height above mean sea level, in metres.

  • east: Easting (New Zealand Map Grid/NZMG).

  • north: Northing (NZMG).

  • vegetation: Vegetation type (Nothofagus solandri or Pinus contorta).

Usage

data(demo.samples)

Format

A TRAMPsamples object.

Licence

This data set is provided under a Creative Commons “Attribution-NonCommercial-NoDerivs 2.5” licence. Please see https://creativecommons.org/licenses/by-nc-nd/2.5/ for details.

TRAMPR documentation built on Feb. 8, 2022, 1:08 a.m.