readPatients.xl()
, that table then is pushed to "other tables" in the CDM reference using patientsCDM()
.generateTestTable()
creates an Excel file with sheets that correspond to OMOP-CDM tables.
patientsCDM()
now accepts cdmName
as argument to allow for custom cdm name.
getEmptyCDM()
returns an empty cdm object.
readPatients()
now has a parameter to select either Excel or CSV files as an input.
readPatients.xl()
and readPatients.csv
are also exported functions for convenience.
graphCohort()
provides a visualisation of cohort timelines.
JSONS are saved in the testthat/testCases folder as default for better test self-containment.
Tested with MIMIC database.
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.