simu_tbss | R Documentation |
Function for deploying simulation using TBSS algorithm
simu_tbss( nreps, simu_method = c("sparse", "group sparse", "fLS"), nob, k, lags = 1, lags_vector = NULL, brk, sigma, skip = 50, group_mats = NULL, group_type = c("columnwise", "rowwise"), group_index = NULL, sparse_mats = NULL, sp_density = NULL, signals = NULL, rank = NULL, info_ratio = NULL, sp_pattern = c("off-diagonal", "diagoanl", "random"), singular_vals = NULL, spectral_radius = 0.9, est_method = c("sparse", "group sparse", "fLS"), q = 1, tol = 0.01, lambda.1.cv = NULL, lambda.2.cv = NULL, mu = NULL, group.index = NULL, group.case = c("columnwise", "rowwise"), max.iteration = 100, refit = FALSE, block.size = NULL, blocks = NULL, use.BIC = TRUE, an.grid = NULL )
nreps |
A numeric integer number, indicates the number of simulation replications |
simu_method |
the structure of time series: "sparse","group sparse", and "fLS" |
nob |
sample size |
k |
dimension of transition matrix |
lags |
lags of VAR time series. Default is 1. |
lags_vector |
a vector of lags of VAR time series for each segment |
brk |
a vector of break points with (nob+1) as the last element |
sigma |
the variance matrix for error term |
skip |
an argument to control the leading data points to obtain a stationary time series |
group_mats |
transition matrix for group sparse case |
group_type |
type for group lasso: "columnwise", "rowwise". Default is "columnwise". |
group_index |
group index for group lasso. |
sparse_mats |
transition matrix for sparse case |
sp_density |
if we choose random pattern, we should provide the sparsity density for each segment |
signals |
manually setting signal for each segment (including sign) |
rank |
if we choose method is low rank plus sparse, we need to provide the ranks for each segment |
info_ratio |
the information ratio leverages the signal strength from low rank and sparse components |
sp_pattern |
a choice of the pattern of sparse component: diagonal, 1-off diagonal, random, custom |
singular_vals |
singular values for the low rank components |
spectral_radius |
to ensure the time series is piecewise stationary. |
est_method |
method: sparse, group sparse, and fixed low rank plus sparse. Default is sparse |
q |
the AR order |
tol |
tolerance for the fused lasso |
lambda.1.cv |
tuning parameter lambda_1 for fused lasso |
lambda.2.cv |
tuning parameter lambda_2 for fused lasso |
mu |
tuning parameter for low rank component, only available when method is set to "fLS" |
group.index |
group index for group sparse case |
group.case |
group sparse pattern: column, row. |
max.iteration |
max number of iteration for the fused lasso |
refit |
logical; if TRUE, refit the VAR model for parameter estimation. Default is FALSE. |
block.size |
the block size |
blocks |
the blocks |
use.BIC |
use BIC for k-means part |
an.grid |
a vector of an for grid searching |
A S3 object of class, named VARDetect.simu.result
A list of estimated change points, including all replications
A list of estimated sparse components for all replications
A list of estimated low rank components for all replications
A list of estimated model parameters, transition matrices for VAR model
A numeric vector, containing all running times
nob <- 4000; p <- 15 brk <- c(floor(nob / 3), floor(2 * nob / 3), nob + 1) m <- length(brk); q.t <- 1 sp_density <- rep(0.05, m * q.t) signals <- c(-0.6, 0.6, -0.6) try_simu <- simu_tbss(nreps = 3, simu_method = "sparse", nob = nob, k = p, lags = q.t, brk = brk, sigma = diag(p), signals = signals, sp_density = sp_density, sp_pattern = "random", est_method = "sparse", q = q.t, refit = TRUE)
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