Examp3.2: Examp3.2 from Duchateau, L. and Janssen, P. and Rowlands, G....

Description Author(s) References See Also Examples

Description

Examp3.2 is used for inspecting probability distribution and to define a plausible process through linear models and generalized linear models.

Author(s)

  1. Muhammad Yaseen (myaseen208@gmail.com)

References

  1. Duchateau, L. and Janssen, P. and Rowlands, G. J. (1998).Linear Mixed Models. An Introduction with applications in Veterinary Research. International Livestock Research Institute.

See Also

ex124

Examples

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#-------------------------------------------------------------
## Example 3.3 p-88
#-------------------------------------------------------------
# PROC MIXED DATA=ex32;
# CLASS sex sire_id breed;
# MODEL ww = sex agew breed/SOLUTION DDFM=SATTERTH;
# RANDOM sire_id(breed)/SOLUTION;
# LSMEANS breed/ADJUST = TUKEY;
# RUN;
 
 library(lmerTest)
 str(ex32)
 ex32$sire_id1 <- factor(ex32$sire_id)
 ex32$breed1   <- factor(ex32$breed)
 
 fm3.4 <- 
  lmerTest::lmer(
         formula    = Ww ~ sex + agew + breed1 + (1|sire_id1:breed1)
       , data       = ex32
       , REML       = TRUE
       , control    = lmerControl()
       , start      = NULL
       , verbose    = 0L
    #  , subset
    #  , weights
    #  , na.action
    #  , offset
       , contrasts  = list(sex = "contr.SAS", breed1 = "contr.SAS")
       , devFunOnly = FALSE
    #  , ...
       )                       
 summary(fm3.4)
 lmerTest::anova(object = fm3.4, ddf = "Satterthwaite")
 lmerTest::lsmeansLT(model = fm3.4, test.effs = "breed1")

VetResearchLMM documentation built on May 29, 2017, 4:15 p.m.

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