wcq: WCQ QTL detection

Description Usage Arguments Value Author(s) Examples

View source: R/wcq.R

Description

Performs QTL detection using Chen-Qin two sample mean test.

Usage

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wcq(marker_data, trait_data, alleles)

Arguments

marker_data

m x n matrix/array containing marker score data; m is the number of markers, n is the number of samples

trait_data

t x n matrix/array containing trait value data; t is the number of traits, n is the number of samples

alleles

vector containing the marker scores representing the alleles; currently supports diploids only; third entry assumed to be score for heterozygous marker

Value

pval_matrix

m x t array/matrix containing p-values of each marker as being a potential QTL for a trait

Author(s)

Jan Michael Yap

Examples

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WCQ documentation built on May 2, 2019, 9:34 a.m.