affinityPropagation: Affinity Propagation
In WebGestaltR: Gene Set Analysis Toolkit WebGestaltR
View source: R/affinityPropagation.R
affinityPropagation R Documentation
Affinity Propagation
Description
Use affinity propagation to cluster similar gene sets to reduce redundancy in report.
Usage
affinityPropagation(idsInSet, score)
Arguments
idsInSet
A list of set names and their member IDs.
score
A vector of addible scores with the same length used to assign input preference;
higher score has larger weight, i.e. -logP.
Value
A list of clusters and representatives for each cluster.
- clusters
A list of character vectors of set IDs in each cluster.
- representatives
A character vector of representatives for each cluster.
Author(s)
Zhiao Shi, Yuxing Liao
WebGestaltR documentation built on June 7, 2023, 6:10 p.m.
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View source: R/affinityPropagation.R
| affinityPropagation | R Documentation |
Affinity Propagation
Description
Use affinity propagation to cluster similar gene sets to reduce redundancy in report.
Usage
affinityPropagation(idsInSet, score)
Arguments
idsInSet |
A list of set names and their member IDs. |
score |
A vector of addible scores with the same length used to assign input preference; higher score has larger weight, i.e. -logP. |
Value
A list of clusters and representatives for each cluster.
- clusters
A list of character vectors of set IDs in each cluster.
- representatives
A character vector of representatives for each cluster.
Author(s)
Zhiao Shi, Yuxing Liao
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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