gseaPermutation: Permutaion in GSEA algorithm
In WebGestaltR: Gene Set Analysis Toolkit WebGestaltR
gseaPermutation R Documentation
Permutaion in GSEA algorithm
Description
Permutaion in GSEA algorithm
Usage
gseaPermutation(inset_scores, outset_scores, expression_value)
Arguments
inset_scores
Scaled score matrix for genes in sets
outset_scores
Normalized score matrix for genes not in sets
expression_value
Vector of gene rank scores
Value
A vector of concatenated random minimal,maimum and best running sum scores for each set.
Author(s)
Yuxing Liao
WebGestaltR documentation built on June 7, 2023, 6:10 p.m.
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| gseaPermutation | R Documentation |
Permutaion in GSEA algorithm
Description
Permutaion in GSEA algorithm
Usage
gseaPermutation(inset_scores, outset_scores, expression_value)
Arguments
inset_scores |
Scaled score matrix for genes in sets |
outset_scores |
Normalized score matrix for genes not in sets |
expression_value |
Vector of gene rank scores |
Value
A vector of concatenated random minimal,maimum and best running sum scores for each set.
Author(s)
Yuxing Liao
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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