checkJumpDistance: Check if tags are jumping over arrays
In actel: Acoustic Telemetry Data Analysis

checkJumpDistance

R Documentation

Check if tags are jumping over arrays

Description

Check if tags are jumping over arrays

Usage

checkJumpDistance(
  movements,
  tag,
  bio,
  detections,
  spatial,
  arrays,
  dotmat,
  paths,
  jump.warning,
  jump.error,
  GUI,
  save.tables.locally,
  n
)

Arguments

`movements`	The movements table for a specific tag.
`tag`	The tag being analysed.
`bio`	A table with the tags and biometrics of the studied animals.
`detections`	The detections data.frame for a specific tag.
`spatial`	A list of spatial objects in the study area.
`arrays`	a list containing information for each array.
`dotmat`	The matrix of distances between arrays.
`jump.warning`	If a tag crosses a number of arrays equal or greater than `jump.warning` without being detected, a warning is issued. Defaults to 2. To disable jump warnings, set to Inf. Must be equal to or lower than `jump.error`.
`jump.error`	If a tag crosses a number of arrays equal or greater than `jump.error` without being detected, user intervention is suggested. Defaults to 3. To disable user intervention suggestions, set to Inf.
`GUI`	One of "needed", "always" or "never". If "needed", a new window is opened to inspect the movements only if the movements table is too big to be displayed in R's console. If "always", a graphical interface is always created when the possibility to invalidate events emerges. If "never", a graphical interface is never invoked. In this case, if the table to be displayed does not fit in R's console, a temporary file will be saved and the user will be prompted to open and examine that file. Defaults to "needed".
`save.tables.locally`	Logical: If a table must be temporarily stored into a file for user inspection, should it be saved in the current working directory, or in R's temporary folder?
`n`	A string indicating the overall progress.